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berkeley_reactor_200306_planktonic_scaffold_11935_27

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(30480..31811)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=2 Tax=Singulisphaera acidiphila RepID=L0DAT5_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 416.0
  • Bit_score: 535
  • Evalue 3.70e-149
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 416.0
  • Bit_score: 535
  • Evalue 1.10e-149
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGA25960.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 416.0
  • Bit_score: 535
  • Evalue 5.20e-149

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1332
GTGCAGGCCGATCGCAAACCTCCGGCCCTCGTGAACTTCATGGCGGACGCCCCCGTCCCTTCGACTTCGATGCGATCCCGCACGTTCGCGGCCCTGGACAATCCCGACTATCGGCGTTACTACATCGGGCAGGGGATCAGCCTCATCGGCACCTGGCTCCAAGCCGCCGCGGTCAACTGGCTCGTCTTCGAGCAGACCAACTCGGAATACTGGCTCGGCATCGTCGGTGCCGCGAGCCTCCTCCCGGGCCTGCTCGTCGGGCTCATCGCCGGTGAGCTCGCCGACCGGTTCGCCCCACGCAAGATGATCCTGGTCATGGAAGCGGGCCAGATGGCGCTGGCGTTCGCGCTCGCGGCGCTCGTGAGCTTCGACATCATCGAAGTCCCGATCCTGATCTTGATCCTGGCGCTGACGCGGATCTGCGTCACGTTCGAAATGCCGAGTCGCCAGGTCTTCCTCTACGAGATCGTCGGCCGGGCCGACCTAACGAATGCGATCGCACTGAACTCGGGTCTCTTCAACGCGTCGCGCGTGCTCGGGCCGGCCCTGGCGGGGTTCTTCTACGCGAGCTTCGGCCCCACGGCCTGCTTCCTGCTCAACGGCACGAGCTATCTCGGGGCCCTGGGGGCCTTGCTGATGATCCGCCGAGGGCATACTCGGGCCGGCGCGGGGACCAAGGGCCCGGGGACGGGATTCGGCGGGGTCGCCTATCTGTGGCATGACCGCAAGATCGCGATGCACTTCCTCCTCATGGCCTTCTTCGGCGTGGTAGGCATGGGCTTCGACGCCATGATCCCGGCCTACGCCCGCCGAGTCGTCCGGACGGACGTCGTCGGCTACAGCGTGATCCTCGCCTGCAGCGGGGTCGGTGCGACCCTGGGGGCCTTGATCGTGGCCTCGCTCGGGGGCATCAAGCGCAAGGAGGGGCTCGTCCTGGCCGGCCTCGTCCTCTTCGGCGGATCGCTCGCCGCGGCGGCCGTCCTCCCGCCCCTGGCGGGGTCTATCCTTGAAGGCAAGGGGAGGCTCTTGGTGGCCTCCGGCTGCGTCCTCGGCGTGGGCTTCGGCGCCGTGCTCTTCTACGCGGCGACCCAAACCTTGATCCAGATGACCGTGCCCGACCACCTCCGCGGCCGGGTCATGGGGATCTGGATGATCGTCTATTCGGGCTCGGTGCCGCTCGGCTCACTCTGGACCGGCCGGCTCGCGTCGAGCCTCGGGGTGACGACCGCCATCTTCATCTCGGCGTCGTTGTGCCTGGTGGTGGCGCTCGTGGGGATCTCCTCGAAAAGCCTCTTCCACGTAGACAATCGACCCGAGCCCCTGGCCGAGTGA
PROTEIN sequence
Length: 444
VQADRKPPALVNFMADAPVPSTSMRSRTFAALDNPDYRRYYIGQGISLIGTWLQAAAVNWLVFEQTNSEYWLGIVGAASLLPGLLVGLIAGELADRFAPRKMILVMEAGQMALAFALAALVSFDIIEVPILILILALTRICVTFEMPSRQVFLYEIVGRADLTNAIALNSGLFNASRVLGPALAGFFYASFGPTACFLLNGTSYLGALGALLMIRRGHTRAGAGTKGPGTGFGGVAYLWHDRKIAMHFLLMAFFGVVGMGFDAMIPAYARRVVRTDVVGYSVILACSGVGATLGALIVASLGGIKRKEGLVLAGLVLFGGSLAAAAVLPPLAGSILEGKGRLLVASGCVLGVGFGAVLFYAATQTLIQMTVPDHLRGRVMGIWMIVYSGSVPLGSLWTGRLASSLGVTTAIFISASLCLVVALVGISSKSLFHVDNRPEPLAE*