ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_22519_2

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(4028..5626)

Top 3 Functional Annotations

Value Algorithm Source
2-nitropropane dioxygenase n=1 Tax=Singulisphaera acidiphila RepID=UPI000365B933 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 527.0
  • Bit_score: 863
  • Evalue 9.30e-248
PfaD family protein similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 527.0
  • Bit_score: 861
  • Evalue 7.70e-248
PfaD family protein {ECO:0000313|EMBL:AGA27883.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 527.0
  • Bit_score: 861
  • Evalue 3.80e-247

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1599
GTGTTGGTTCCCACGACCTTCGAAGAGACACTCGAGCGGGCGCTTTGCCGGGTCCGTGACCCGTTCTTGATCGTAGAACGAGGGGGAGGACACGCGCTCCAGGAGTGGGACTCGACGGCCTGGGGAGACCCCGCGGAGGCCGATCGGGTGATCGGCGTCTTGCCCGCCTGCCGGCCCGAAAACCTCGGCGACACCTCGTTTTGCGCCGAGCACCGGCTCAAGTTCCCTTACGTCTCGGGCGCGATGGCCAATGGGATCGGCTCGGCCGAGATCGCCGAGGCGATGGGCCGCGCCGGGATGCTCGGGATCTTCGGCGCGGCGGGGCTGCCGCCGGCCGCCGTCGAGGCGGCCATCGACCGGCTCGGGAGGACGCTCGGCCCGGCGGTCCCGTACGGGTTCAACCTGATCCACAGCCCCAACGAGCCCGAGCTCGAGGCGGCCGTCGCGGCGCTCTACCTTCGAAGGGGGGTCCGCCTGGTCGAGGCCTCGGCGTACCTCGACCTGACCCTCCCCGTGGTCCGCTACCGGGTCCACGGGATCAGGGTCGGCGAGGACGGGCGGGTCGTGGTGCCGAACCGGGTCATCGCCAAGGTCTCTCGCGTCGAGGTCGCCTCGAAGTTCCTCGCCCCCCCGCCCGCGAAGTTCCTCCGGGAGCTGGTGGGCTCGGGGGAGATCACCGCCGAGCAGGCCAACCTCGGGGCGCGGATCCCGATGGCGGACGACGTGACGGCCGAGGCCGACTCCGGCGGCCACACGGATAACCAGCCGGCCGTGGTGCTGCTGCCGACGCTGCTCGCCCTCCGCGACCGGCTCCAGGCGGAGTACGGCTACGACCGGCCGCTCCGGATCGGGGCGGCGGGGGGGATCTCGACCCCCTGGGCCGCGGCCGCGGCGTTCGCGATGGGGGCCGCGTATCTCGTCGTCGGCTCGGTCAATCAGGGGTGCGTCGAGTCGGGGACGTCCGACACCGTCCGCAAGATGCTCGCCGAGGCGAGGCAGGCCGACATCGCCATGGCCCCCGCCGCCGACATGTTCGAGATGGGGGTGAAGGTCCAGGTGCTCAAGCGGGGCACGATGTTCGCCATGCGCGCGGCCAAGCTGTATGAGGTCTACCGCGCCTGCGAGGCGATCGAGCAGATCCCCGCGCTCGACCGGGCCTCGCTCGAGAAGAACCTCTTCCGGGCCCCCCTGGAGACGATCTGGGACCAGACCCAGGCGTACTTCCGCGACCGCGACCCGGGGCAGCTCGCCCGGGCCTCGAAGGACCCGAAGCACAAGATGGCCCTGGTCTTCCGCTGGTATCTCGGCCAGTCGTCGCACTGGGCGAACGCGGGGGAGCCCTCGAGGGGGGTCGACTACCAGATCTGGTGCGGCCCGGCCATGGCCGCCTTCAACGAGTGGGCCCGCGGGTCGTCCCTGGAGCACCCGGAGAATCGCCGCGTGGTCGTCGTCGCCCTCAACATCCTCTACGGCGCGGCCGTCCTCAGCCGCGCCCGAAGCCTGGCGAGCCAGGGGGTCCACCTCCCCCCGGGCACCCCCCGGCTCACGCCCCTCGGACTCGCGGAGCTCGAAGACCGCCTGGCCATGACCTCAACCTAG
PROTEIN sequence
Length: 533
VLVPTTFEETLERALCRVRDPFLIVERGGGHALQEWDSTAWGDPAEADRVIGVLPACRPENLGDTSFCAEHRLKFPYVSGAMANGIGSAEIAEAMGRAGMLGIFGAAGLPPAAVEAAIDRLGRTLGPAVPYGFNLIHSPNEPELEAAVAALYLRRGVRLVEASAYLDLTLPVVRYRVHGIRVGEDGRVVVPNRVIAKVSRVEVASKFLAPPPAKFLRELVGSGEITAEQANLGARIPMADDVTAEADSGGHTDNQPAVVLLPTLLALRDRLQAEYGYDRPLRIGAAGGISTPWAAAAAFAMGAAYLVVGSVNQGCVESGTSDTVRKMLAEARQADIAMAPAADMFEMGVKVQVLKRGTMFAMRAAKLYEVYRACEAIEQIPALDRASLEKNLFRAPLETIWDQTQAYFRDRDPGQLARASKDPKHKMALVFRWYLGQSSHWANAGEPSRGVDYQIWCGPAMAAFNEWARGSSLEHPENRRVVVVALNILYGAAVLSRARSLASQGVHLPPGTPRLTPLGLAELEDRLAMTST*