ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_25274_3

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1028..1453

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E874D9 similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 140.0
  • Bit_score: 112
  • Evalue 2.50e-22
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49389.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 132.0
  • Bit_score: 109
  • Evalue 3.80e-21
putative nucleic acid-binding protein, contains PIN domain similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 142.0
  • Bit_score: 86
  • Evalue 5.40e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 426
ATGAAGTATGTTCTCGATTCCAACGTGGCGTTGAAATGGGTCCTCCGGGAAAGCGACTCGGGCAAGGCCCGTCGGCTCCGGGACGATTTCGAGAAGGCCCTCCACGAATTGATCGTCCCGGATATCTTCCCGATCGAAATCGCCCATGCCTTGACCCGAGCCGAACGGCGCAAGCTCATCACCCCTTCCCAGGGGAGGGCATTCCTCGGGGATATCCTGGCGACTCAACTCGAGCACCATCCCTACGTCCCGCTCCTCTGGCGGGCTTATGCGATCGCCTCCCAGGCGGAACATGGGGTGTACGACTGCCTTTACGTGGCCCTGGCGGAGCAAGAGGGCTGTGGGCTCGTGTCGGCGGACGACAAGATGATCCGCAAGCTCCAGCCAGGTTTTCCGTTCATCCTCCCTCTCGGGTCGATGCCGTGA
PROTEIN sequence
Length: 142
MKYVLDSNVALKWVLRESDSGKARRLRDDFEKALHELIVPDIFPIEIAHALTRAERRKLITPSQGRAFLGDILATQLEHHPYVPLLWRAYAIASQAEHGVYDCLYVALAEQEGCGLVSADDKMIRKLQPGFPFILPLGSMP*