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berkeley_reactor_200306_planktonic_scaffold_332275_17

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(28699..29853)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 384.0
  • Bit_score: 689
  • Evalue 2.40e-195
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBQ6_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 384.0
  • Bit_score: 689
  • Evalue 1.70e-195
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 384.0
  • Bit_score: 689
  • Evalue 4.90e-196

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1155
ATGGCTTACAGCACGGGTGTGGTTCGGCACAAGACGCGTGAGGTGGGTCTGGGCGATCACGTGGTCGGCGGCGACAACCCGATCTGGGTCCAGTCGATGACGACGACGAACACGTTCGACGCCGAGGCGACCATCGAGCAGATCCGCCGCCTGCAAGACGCCGGCTGCGAGATCGTCCGCGTCACCGTCCCCAAGAAGGAGGACGTCGAGGCCTGCCGGCTGATCCGCGCGAACATCAACATCCCGCTCATCGCCGACATCCACTACGACTACCGCATGGCCCTGGCCTGCCTCGACGCGACCACCGAGGACGGCCGGCCCGCCGTCGACAAGATCCGGATCAACCCCGGCAACATCGGCGGCGAGGAACGATTCAAGGAAGTCGTCCGCAAGGCCCGCGACAAGGGCATCCCGATGCGGATCGGGGTCAACTCGGGGAGCCTCGAGAAGGACCTGATCGAGAAATACGGCTTCCCCTGCCCCGAGGCGATGGTCGAGAGCGCCCTCCGCGCGATCGAGATGGCCGAGGGCCTGGGATACCACCAGATGATCGTCTCGCTCAAGGCGAGCCACGTCCCGACCGCCGTCGAGTGCTACTCCCTGTTCGCGTCCAAGTGCGACTACCCGACCCACGTCGGGATCACCGAGGCCGGCTCGAAGGAGTACGGGACGCTGAAGAGCGCGGCCGGGATCGGCGCGATCCTGCTCCGCGGGGTCGGCGACACGATCCGGGTCTCGCTCCTGGGCGACCCGGTCCCCGAGATCGCGGCCGGCTTCGACATCCTCCGCGCCTGCGACCGCCGCGTCACCCGGCCCGAGGTCGTCGCCTGCCCCACCTGCGGCCGGCTCGACATCGACCTCGAACGGATCGTCGCCGAGGTCGAGGCCAAGATGGCCCACCTCAAGAACCCGCTCCGGATCAGCATCCTCGGCTGCCTGGTCAACGGCTTCGGCGAGGCCAAGGAAGCCGACCTCGGCATCGCCGCCGGCTCCGGCAAGGGGGTCATCTTCAAGCGCGGCGTCCCGATCCGGCACGTCAAGGAGGCCGACATGGTCCAGGCGCTGCTCGAAGAGGTCGAACGCTTCGAAGAGGACACGCCGGCCCTGAAGTCGTATCAGGAAAAGAAGAAGTCGGCGCTGCCGGTCCTCAACTGA
PROTEIN sequence
Length: 385
MAYSTGVVRHKTREVGLGDHVVGGDNPIWVQSMTTTNTFDAEATIEQIRRLQDAGCEIVRVTVPKKEDVEACRLIRANINIPLIADIHYDYRMALACLDATTEDGRPAVDKIRINPGNIGGEERFKEVVRKARDKGIPMRIGVNSGSLEKDLIEKYGFPCPEAMVESALRAIEMAEGLGYHQMIVSLKASHVPTAVECYSLFASKCDYPTHVGITEAGSKEYGTLKSAAGIGAILLRGVGDTIRVSLLGDPVPEIAAGFDILRACDRRVTRPEVVACPTCGRLDIDLERIVAEVEAKMAHLKNPLRISILGCLVNGFGEAKEADLGIAAGSGKGVIFKRGVPIRHVKEADMVQALLEEVERFEEDTPALKSYQEKKKSALPVLN*