ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_339394_3

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2359..4329

Top 3 Functional Annotations

Value Algorithm Source
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:CDS54281.1}; EC=2.1.1.80 {ECO:0000313|EMBL:CDS54281.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 591.0
  • Bit_score: 453
  • Evalue 5.00e-124
PAS domain S-box n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFS3_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 532.0
  • Bit_score: 422
  • Evalue 5.20e-115
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 532.0
  • Bit_score: 422
  • Evalue 1.50e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polaromonas sp. CG9_12 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1971
ATGTCGATCAAGGGACGCCCCTGGCCGCTGCGATACGGGTGTGCGATCCTTTGCGTCGCGCTCGCGACCGCCATTCGAGTGTGGCTCAACCCGATGTTGGGGGCTCGGTTCCCGGTCATCACGTACTTCCCGGCCCTGGTCTTCGCGGCCTGGTTCGGCGGCCTCGGGCCGAGCCTCCTCGCCTTGCTCCTCAGCGCGGTGACGGCCCGGTACTACTTCCTCCCCCCCTACGGCGGCCTGCTCTCCATCGAGGACCCCGTCTCCCAGGTCGGCTTCGGTATCTTCCTCTTCGTCGGCCTGGCGAACTCCCTGATGGGGGGCGCGATGAACGTCATCCAAAGACGCGCCGAGGCGAGCGCCGAGGACGCCCGCACGAAGCAGCGCCAGCTCGAACGTGAGGTCGCCGAACGTTGGAAGGTCGAGGAGAAGGTCCGGGAGCATCGGGAATGGCTCCGGGTCACGCTCGAGAGCATCGGCGACGCCGTCATCGCCACCGACCTCGGCGGCCGGATCACCCTCCTCAACTCCGTCGCCCGCGCCCTCACCGGCTGGGACTCCGAAGACGCCCTGGGACGCCCCTTGGAGGAGGTCTTCCGTGTCATCGACGAACGGTCGAGGACGCCGGCCGCCAACCCGGTCGACCGGGCCTTCCGCGAAGGCAAGGTCATTGGGCCGGCGCAGCTCCTGCTCGTCGCCCGGGACGGCTCGGAACGGCCGATCGACGACAGCGCCGCCCCGATCCGCGACGGGGCGGGACGGGTCGTCGGCGTCGCCCTCGTCTTCCGCGACGTCACCGAGCGGAGGCGCAACGAGGAGGCCCTCCGCGAGGCCGACCGTCGCAAGGACGAGTTCCTCGCCGTCCTCGCGCACGAGCTCCGCAACCCCCTCGCCCCGATCCGCAACGCCTTGCACCTGATGGGCGACAGCTCCGGCGACCGCCGCGAGTTCGAGTCCGAGCGGGCGATGGCCGAACGCCAGGTCATCCACCTGGCGCGGCTGGTCGACGACCTCATGGACGTCTCGAGGATCAGCCAGGGCAAGATCGCCTTGCGCAAGGAGGTCGTCGACGTCATGGCCGCCGTCGACCGCGTGGTCGAGTCGTCGCGGTCGTCGATCCGGGACCGGGGCCATGCCCTGACCGTCGCCAGGCCCGAGGTCCCGATCCGGCTCGAGGCCGACCCGACCCGGCTGGAGCAGATCCTCGACAACATCCTCAGCAACGCCGTCAAGTACACCGAGCCCGGCGGCCAGATCCGGCTCTCCGCGGCCCGCGAAGGGGATGACGTCGTCGTCCGGGTGCGCGACTCAGGCATCGGCATCGAGCCGGAGATGCTCCCCCGGATCTTCGAGATGTTCGTCCAGGCCGGGAGCGACCCCGGCCGATCGAAAGGGGGCATGGGGATCGGCCTCGGGCTCGTCCGTGCCCTCGTCGACCTCCACGGCGGCTCCGTCATCGCCCGGAGCGGCGGCCCCGGCGAGGGGAGCACCTTCGAAGTCCGCCTGCCCGCCCTGCCGATCGTCGCGGAGGCTCGCGACGAGCCGAAGCCCCTGCCCTCGCCGCCGGCCCCCGCACCGGCCGCCGCCGAGCCGACCCTACCGCGGCGTCGGATCCTCGTCGTCGACGACAACGAAGACGCCGCGCGGAGCCTCGCGCGGCTCCTCTCTCGGCTCTACCGCCAGGAAGTCCGCGTCGCCCACAGCGGCATCGCCGCCCTCGAGGCCGCCGACGAGTTCCACCCCGAGGTCGTCCTCCTCGACATCGGCATGCCCGGCATGGACGGATACGAGGTCGCCCGCCAGATGCGCGAACGCCCCAACCCTGACGCCCTGCTCCTCGTCGCCGTCACCGGCTGGGGCCAGGACGAAGACCGCCGCAAGTCCAAGGAAGCCGGCTTCGACCGCCACCTCGTCAAGCCCGTCGACCCCGAAGCCCTCCGCACCCTCTTCATGGACTTCCGCGACGCGAGCTGA
PROTEIN sequence
Length: 657
MSIKGRPWPLRYGCAILCVALATAIRVWLNPMLGARFPVITYFPALVFAAWFGGLGPSLLALLLSAVTARYYFLPPYGGLLSIEDPVSQVGFGIFLFVGLANSLMGGAMNVIQRRAEASAEDARTKQRQLEREVAERWKVEEKVREHREWLRVTLESIGDAVIATDLGGRITLLNSVARALTGWDSEDALGRPLEEVFRVIDERSRTPAANPVDRAFREGKVIGPAQLLLVARDGSERPIDDSAAPIRDGAGRVVGVALVFRDVTERRRNEEALREADRRKDEFLAVLAHELRNPLAPIRNALHLMGDSSGDRREFESERAMAERQVIHLARLVDDLMDVSRISQGKIALRKEVVDVMAAVDRVVESSRSSIRDRGHALTVARPEVPIRLEADPTRLEQILDNILSNAVKYTEPGGQIRLSAAREGDDVVVRVRDSGIGIEPEMLPRIFEMFVQAGSDPGRSKGGMGIGLGLVRALVDLHGGSVIARSGGPGEGSTFEVRLPALPIVAEARDEPKPLPSPPAPAPAAAEPTLPRRRILVVDDNEDAARSLARLLSRLYRQEVRVAHSGIAALEAADEFHPEVVLLDIGMPGMDGYEVARQMRERPNPDALLLVAVTGWGQDEDRRKSKEAGFDRHLVKPVDPEALRTLFMDFRDAS*