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berkeley_reactor_200306_planktonic_scaffold_12886_13

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 13925..14677

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF36_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 250.0
  • Bit_score: 318
  • Evalue 3.10e-84
ABC-2 type transporter {ECO:0000313|EMBL:EEF61534.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 250.0
  • Bit_score: 318
  • Evalue 4.30e-84
nosY; ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 253.0
  • Bit_score: 176
  • Evalue 7.00e-42

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 753
ATGAGGATTTTCTGGACGCTGTTCCGCCGGGAGCTGGGCACGTTTTTTCTTTCGCTGACCGGCTATGTCATCATCGCGGCGATCACGCTGCTGACGGGGTTGAGTTTCGTGGTGCTGGTGCAAAATCTGGGCTCCGATCCGACGCCGATGCCGTTGACGGAGATTTTTTACCGGACGTATTTCTTCTGGCTGATCGTGCTGCTGGCGGCGCCGGTGATGACGATGCGGCTGTTTGCGGCGGAAAAGGCCAGCGGCACTTTTGAAACCCTGATGACCACGCCGGTGGGCGACCTGGAGGTGGTGCTGGCGAAATTCTCGGCCGCGCTGTTTTTCTACATGTTCGCGTGGCTGCCGCTGCTGGCGTGCCTCTACATTTTGCGGCATTTCACCCAGCAACACACGGGCATGGATGGCGGGACGCTCGGGGGCATGTTTCTGGGCATTTTCCTGACGGGCGGCTTGTTTCTTTCGCTGGGCTGCTTTGCCTCGTCGCTGACCAAAAGCCAGATGGCGGCGGCCATGATCAGCTTCGTGCTGGGCGTCAGCCTGTTCGCGCTGGGATTTCTCGCCCAGGCGATTCCCTCGGCGACCGGCTGGCAATCGCAGGTGATCGCCACGTTCGGCCTGTTCAACCAGATGGGAGATTTCGCGCGGGGCGTGGTGGACACGCGCACCGTCATCTTTTATGCGAGCGCCACGTTTCTCTTTCTCTTTCTGACCCTGCGCGTGGTGGAAAGCCGGCGCTGGAAATAA
PROTEIN sequence
Length: 251
MRIFWTLFRRELGTFFLSLTGYVIIAAITLLTGLSFVVLVQNLGSDPTPMPLTEIFYRTYFFWLIVLLAAPVMTMRLFAAEKASGTFETLMTTPVGDLEVVLAKFSAALFFYMFAWLPLLACLYILRHFTQQHTGMDGGTLGGMFLGIFLTGGLFLSLGCFASSLTKSQMAAAMISFVLGVSLFALGFLAQAIPSATGWQSQVIATFGLFNQMGDFARGVVDTRTVIFYASATFLFLFLTLRVVESRRWK*