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berkeley_reactor_200306_planktonic_scaffold_30796_108

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(170819..171397)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG93_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 33.0
  • Bit_score: 55
  • Evalue 4.90e-05
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EEF61255.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 33.0
  • Bit_score: 55
  • Evalue 6.90e-05

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 579
ATGCTCACAGTCCAGGGGCAGGAAATTGACAAGGTCATCGGCCTTGACCTGCGCGCGGATGATTGCGTCACCAAGCCGTTCGGGGTGCGCGACCGGCTGCTGAACGAAGTCTGGGGCTGCAATAACTACGGCACCATGCGCACGTTGGATCAGATGATGGTGCAACTCCAAAAAAACTCGGCGACAACGGCGGCGAACCGAAGCAATTGCTCACCAGTCACGGTGTGGGTTAAAGGCCGGCGCCGTAGGACAGGCGTCGCGTCTGTGTCTGAAATAAAGCAACACAAGGAAACAAAGGGAATAAAGATATTGGCTCATGAAAGGATGAATCCACGCGAACAAATCGGTTGCTTTGTTGTCTTGGTTGCCTTCGGTTACTCCTCCTGGATTGGTGTGATGTCAGAGACAGGCGCGACGCCTGTCCTACCTTCGTTGGCATTTCCGAACGCTGGCGTGGAAAACGGGGCGCATCGGTTGATTGGCGTATCGGGCTGCCTGCAAAAAAAGGCCGCTGGAGAATCCAGCGGCCTGGCGATTTTGATTGAAGCTTACGGCAAATCCGTCGCGCCCATCAGATAA
PROTEIN sequence
Length: 193
MLTVQGQEIDKVIGLDLRADDCVTKPFGVRDRLLNEVWGCNNYGTMRTLDQMMVQLQKNSATTAANRSNCSPVTVWVKGRRRRTGVASVSEIKQHKETKGIKILAHERMNPREQIGCFVVLVAFGYSSWIGVMSETGATPVLPSLAFPNAGVENGAHRLIGVSGCLQKKAAGESSGLAILIEAYGKSVAPIR*