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berkeley_reactor_200306_planktonic_scaffold_30796_110

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 172032..172241

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XE99_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 67.0
  • Bit_score: 120
  • Evalue 4.40e-25
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EEF61990.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 67.0
  • Bit_score: 120
  • Evalue 6.20e-25
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 66.0
  • Bit_score: 90
  • Evalue 1.10e-16

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 210
ATGGCCAGTGGCAAAGTAAAGTGGTTCGATAACAAGAAGGGATTCGGCTTCATTGCCCAAGAGTCTGGACAGGATGTGTTTGTGCATCACACGTCCATTCTCGGGGCAGGCTACAAGACCTTGAATGAGGGGGAAGCCGTCACTTTTGACGCCGTTCCCAGTGACAAAGGCTTGAAAGCGCAGAATGTCCAGCGCGTCAGTCCCGGCTGA
PROTEIN sequence
Length: 70
MASGKVKWFDNKKGFGFIAQESGQDVFVHHTSILGAGYKTLNEGEAVTFDAVPSDKGLKAQNVQRVSPG*