ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_30796_113

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(174186..174968)

Top 3 Functional Annotations

Value Algorithm Source
Hemolysin-coregulated protein (Uncharacterized) n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YB67_THIV6 similarity UNIREF
DB: UNIREF100
  • Identity: 29.6
  • Coverage: 159.0
  • Bit_score: 70
  • Evalue 2.60e-09
putative type VI secretion system effector hcp1 - like protein similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 170.0
  • Bit_score: 89
  • Evalue 1.50e-15
Putative type VI secretion system effector hcp1-like protein {ECO:0000313|EMBL:AIC16927.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 170.0
  • Bit_score: 89
  • Evalue 7.60e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrososphaera viennensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 783
ATGCGTTTTTGGCGAGTCATTTTGCTGGGTTTGAGCGTGGTGGTTTCAACGGCGGAGCCGGCATCCGCTCAAATTTTCCTGCGCTTGGATGGAATCAAAGGTTCCGCGAAGGCGGGGAACCACCCCGGCTGGATGGCCATCCTCTCGGTTCAATGCGGCTTGGGGCGCAGCCTCAACGTGCGCAACGGCGGAGCACAAGGAACGTCCCTGGCGAGCTTTTCTGAAATCACCTGCGCCAAGTCCCTGGATGCCGCTTCGCCGCAGTTGGCGTTTTACGCGGCCGGCGGCGGAAGCAATGTCGTCGAAACGGGGACGCTGGACTTCATTGACTCGAATCCGCATGCGTCCCGATATTTGCGGGTCAATCTCACCAACATTCTGATTTCCAGTTACAGCCAGTCAACCGGCGGCGGGGTGCCCACCGAAACCTTTTCGCTTGCGCCGCTGGTCGTCTCGTGGAACTACGTGCAATACGACGGCGCCAGCGGATTGCCCGCCGGTTATGCTTACGATATTTGGAACTACACGAATGGCAGCGCCAGTTTTGGCAGCAACCGCCCGCCAATCGTCACCACCGGCATCCGTCTGAATGACGGGGTGAAACTCAATTGGTCCGCCGTTTCGGGCCATCAATACGGCATTTATGCGGTGAGCGATTTGCAGCGGCCATTCGTTTTAATCGCCACCGTCACGGCCACCGTTACCGGCACCGACAGTTATCAGTTTACGTCCACCGCGCCGGCAATGTTTTATACGGTGCAGGAAATTCCCGCCGGATATTAG
PROTEIN sequence
Length: 261
MRFWRVILLGLSVVVSTAEPASAQIFLRLDGIKGSAKAGNHPGWMAILSVQCGLGRSLNVRNGGAQGTSLASFSEITCAKSLDAASPQLAFYAAGGGSNVVETGTLDFIDSNPHASRYLRVNLTNILISSYSQSTGGGVPTETFSLAPLVVSWNYVQYDGASGLPAGYAYDIWNYTNGSASFGSNRPPIVTTGIRLNDGVKLNWSAVSGHQYGIYAVSDLQRPFVLIATVTATVTGTDSYQFTSTAPAMFYTVQEIPAGY*