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berkeley_reactor_200306_planktonic_scaffold_30796_114

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(174986..175540)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPE2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 37.2
  • Coverage: 156.0
  • Bit_score: 105
  • Evalue 5.20e-20
Uncharacterized protein {ECO:0000313|EMBL:EYR83983.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 156.0
  • Bit_score: 105
  • Evalue 7.20e-20
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 156.0
  • Bit_score: 103
  • Evalue 4.20e-20

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGTTTTTTAAATGCGCCAAAATAACGGTTCTCCGATGGCTGGTTTTGTTGCCCGGGTTTTTGCTGCCGCTGCAGAGTCAGGCCTACGACTTGTTTATGCAGGTTGCGGGTGTTACCGGCGAAGGACCCAAGGGGCTGATCGCGCTGACCTCATTTCAGTGGGGCGTGAGCCGCGGAATCAGTTCGTCCGCCACTGGCGGAGCCAGCCGGGAGACTTCGGCTCCCGCTTTTTCGGAGGTGACGGTTTCCAAGCAGATGGATTCCGCCTCGCCGCAACTGGCGGCCCTGGCGGCAGCTGGCAGTTCGGGCCTGAAGTGTGTTTTGACGATCAAGGATCACACCACCGGAAATGCGCTCTACACGCTGACGCTGGATAACGTTTTGTTCACCGGATACAGCCTGAGCACGGGCGGAGATCGTCCGTCGGAAACCCTCTCGCTGAACTACACCAAAATCACCTGGGTGTATCAGAGCCTGGACAGTAACGGCGCCACCAATGGTCCGTCCTCTTCGCCCATGGGCTGGGACATCGAGACCGGCAAACCAGTCCAGTGA
PROTEIN sequence
Length: 185
MFFKCAKITVLRWLVLLPGFLLPLQSQAYDLFMQVAGVTGEGPKGLIALTSFQWGVSRGISSSATGGASRETSAPAFSEVTVSKQMDSASPQLAALAAAGSSGLKCVLTIKDHTTGNALYTLTLDNVLFTGYSLSTGGDRPSETLSLNYTKITWVYQSLDSNGATNGPSSSPMGWDIETGKPVQ*