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berkeley_reactor_200306_planktonic_scaffold_37596_14

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(16477..17373)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174565A similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 306.0
  • Bit_score: 281
  • Evalue 6.50e-73
Transcriptional regulator {ECO:0000313|EMBL:EIP99004.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 286.0
  • Bit_score: 225
  • Evalue 7.80e-56
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 286.0
  • Bit_score: 223
  • Evalue 7.80e-56

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Taxonomy

Opitutaceae bacterium TAV1 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 897
ATGAATCGCGCCGCCACTTACGAATTGGAATGTTTTGTTGCCGTTGCCGAGGAACTGAATTTTTCGCGGGCGGCCCGGCGGCTGAACATCAGCCAGCCGCCGCTGTCGCGCCAGATCCAGTCGCTGGAACGCAAACTGGGAACGCGCCTGCTGGTGAGGAACACCCGGACCGTGGCGCTGACGCCGGCCGGGACGCTTTATTTGCAGGACGCGCGGCAGATACTCACCCAGTTGGACGCGGCGGCGGCGGCGGCGGACCGCGCCGCCGGCGGGGAGGTGGCGCGCCTGCGGCTGGCGTTCGTCGGCGCGTTGCTGGATGAAAGCCTGGTCCAGGTGCTGCAGCGGTTTCGCCAGCGGCATCCGCAATGTCAGATTCATCTGGCCGACTTGTCCCCGGCGGAGCAGTTGAAGGCGTTGCAGGCGGGGCAGTTGGACGGCGCCTTCATCGGCGCGCCGCCGTGGAAGCCGGGGCGGAACATTGCCACCCGCATCTGGAAGCGGGAGCCGTTGCTGGCCGCCTTGGGGGAACGCCACAAACTGGCGGCGGCCCGATCCGTTTCCCTCGTGGCGCTCAAGAGTGAAAACTGGGTGATGGTGTCGCGCGCCGGCGCGCCGGCCTTCCGGCGGCAATTTGACCGGCTCTGCGCCGAGGTAAACATGCGCCCCCGGGTGATCCAGGAATCCGAACGCGTGGCGGCGGTGCTGACCATGGTGGCGGCGGAACAGGGCATCAGCCTGCTGCCGGCATCCATTTCGCGCCTGGTGCATCCGGGCGTGGTGTTTCGCAAGGTGAAGGGCGCCGGTTGCCAGTTCGATCACGCCTTTGCCTTTCCGACGGACGGGGCGAAGCCGGCGGTCAAGGAACTTCTGGCCTTGCTGCCGCCGGTTCAAGATTGA
PROTEIN sequence
Length: 299
MNRAATYELECFVAVAEELNFSRAARRLNISQPPLSRQIQSLERKLGTRLLVRNTRTVALTPAGTLYLQDARQILTQLDAAAAAADRAAGGEVARLRLAFVGALLDESLVQVLQRFRQRHPQCQIHLADLSPAEQLKALQAGQLDGAFIGAPPWKPGRNIATRIWKREPLLAALGERHKLAAARSVSLVALKSENWVMVSRAGAPAFRRQFDRLCAEVNMRPRVIQESERVAAVLTMVAAEQGISLLPASISRLVHPGVVFRKVKGAGCQFDHAFAFPTDGAKPAVKELLALLPPVQD*