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berkeley_reactor_200306_planktonic_scaffold_58787_96

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 118832..120559

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecN n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP66_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 575.0
  • Bit_score: 798
  • Evalue 3.10e-228
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 575.0
  • Bit_score: 798
  • Evalue 4.30e-228
DNA recombination protein RecN similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 578.0
  • Bit_score: 412
  • Evalue 1.00e-112

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1728
ATGCTGACCACGCTGCGCATCAAAAACCTCGCCCTCGTGACCGACCTCACGCTGGAACTCCAGCCGGGTTGCAACGTCATTACCGGCGAAACCGGCGCGGGCAAATCCATCATTCTCGGTGCGCTAAACCTCGTGCTCGGCGAACGCGCCGACCGCACGCTCATCCGCAACGGCGAGGACAGTTGCAGCGTGGAGGCGGTATTCGATGTAAAAAAACTTCGTGTCCCATTAAAAGGATTTCTCGACGAAAACGGCCTGGAACCGTGCGAAGACCATCAGCTTGTGCTCAAGCGCACCTTCACCAGCGCCGGAACGAATCGTCAGTTCGTCAACGGTTCGCCGACGACGCTGGCCACGCTCGCCAGTCTCGGCGAATGGCTGGTGGACATGCACGGCCCGCACGATCACCAGTCGCTGCTGCACGCCGCAAAACAACTGGCCATTCTGGATGCGTTCGGTGGTCTGGAAAAAGAGCGCGCCGCGTTTGGTGAACTTGTGCGCCGGCGCGCCGCGTTGGCGAATGAGAAGGCCGCGCTCATCGTGGACGAAAAAACCTACGCGCAACAACTCGATTTGCTGCGGTTTCAAGTGCAGGAAATTTCCGCCGCGCGGTTGCAGCCGGACGAAGAGCAATCCGTCGAGGCAGAATTCAATCGCGCCAGCAACGCCGCAAAACTGCTCCAACTCAGCCAATCCGCGCTCGACGCTTTGAGTGAAAGCGATGAATCGCTCCTGACGCAATCCGGCGCCATCGGCCGGATTTTGACTGAGCTGCAACGCGTGGATGCCGGCGCGGCGAATCTCGTGGAGTTGCACGTGCAGGCCGGCGAGACGTTGCGCGAGTTGCAAAACGAGCTGTCGCATTACGCCGACAAAGTGGACGTGGACCCGGCGCGGCTGGCGGAGCTGGAAGAACGCTTGAATTTGATTCATTCGCTCAAGCGCAAATACGGTTCCACGCTGGCCGAAGTCATTGCGTTCGGCGACGAGGCGAAACAGAAGTTGCAAGCGCTGGAATCGCGCGACGCCGAACTGGCACGGATTAATGCCGCGCTGGAGAAATTGGACGCGGAAATTTTAAGCGCCGGGAAAAAACTTTCTGCCGCGCGCAAAAAGGTGATTCCGCAACTGGCCAAAGCCGTGAGCCGGCAGTTGGAGGATTTGGGTTTCAAGCAGGGCAAATTTGATGTGGAAATCAAAACTGAAACCAGCCTCACGCCAAGCCCGCAAAGTTCGCCAAGGGGAACGAATTCGACTGAAAATTCTTTGCGTCCTTCGCGTTCTTTGCGTGAGACCGGTTTGGATGAAATTGAATTTCAATTCGCACCGAATCCGGGCGAGCCGGCGAAACCGCTGCGTGCAATTGCGTCGTCCGGCGAAATGGCGCGGGTGATGTTGGCGCTGAAAACCGTGCTGGCGGCGGAGGATGAAATTCCGGTGCTGGTCTTTGACGAAGTGGACGCCAACGTCGGCGGCGAAACGGCCAACGCCGTGGGCGAAAAGATGAAACAAATCGCCGCCAAACGTCAGGTGTTGTGCATTACGCATTTGCCGCAGGTGGCCGCGCCGGCGGACGCGCATTACGTCGTGAGCAAGCAGGTGAAAAACGGCCGGACGATTTCCGAAATCATTCCGCTGGATAAAAAATCCCGCGTTACCGAACTCGCGCGCATGCTGGGCGGCCAGACCGACGCCGCGCGTAAGCACGCCGAGGCATTGTTGAAATGA
PROTEIN sequence
Length: 576
MLTTLRIKNLALVTDLTLELQPGCNVITGETGAGKSIILGALNLVLGERADRTLIRNGEDSCSVEAVFDVKKLRVPLKGFLDENGLEPCEDHQLVLKRTFTSAGTNRQFVNGSPTTLATLASLGEWLVDMHGPHDHQSLLHAAKQLAILDAFGGLEKERAAFGELVRRRAALANEKAALIVDEKTYAQQLDLLRFQVQEISAARLQPDEEQSVEAEFNRASNAAKLLQLSQSALDALSESDESLLTQSGAIGRILTELQRVDAGAANLVELHVQAGETLRELQNELSHYADKVDVDPARLAELEERLNLIHSLKRKYGSTLAEVIAFGDEAKQKLQALESRDAELARINAALEKLDAEILSAGKKLSAARKKVIPQLAKAVSRQLEDLGFKQGKFDVEIKTETSLTPSPQSSPRGTNSTENSLRPSRSLRETGLDEIEFQFAPNPGEPAKPLRAIASSGEMARVMLALKTVLAAEDEIPVLVFDEVDANVGGETANAVGEKMKQIAAKRQVLCITHLPQVAAPADAHYVVSKQVKNGRTISEIIPLDKKSRVTELARMLGGQTDAARKHAEALLK*