ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_66144_16

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 15174..15989

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFR4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 267.0
  • Bit_score: 332
  • Evalue 2.90e-88
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF61428.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 267.0
  • Bit_score: 332
  • Evalue 4.10e-88
short chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 262.0
  • Bit_score: 269
  • Evalue 8.60e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 816
ATGCACACTCCATTGAAAAACAAAACCACCTTGGTTACCGGCGTTTCGTCCGGCATCGGTCGGGAAATCGCGCAACTGCTGGCAGCGCAAGGCGCACGCGTGTTCGGCACGGTGCGCGATCCGCAATCTGCGAAGTCGATTCCCGGCGTGGAAATCATCCGGCTGGATGTCACGGAAGACGCCAGCGTGACCGAGGCGATTCAAGGTGTGACGCAGAAAGCGGGCGAGATTCACATCCTCGTCAATAACGCCGGTTATGCGCTGACGGGCGCGTTGGAAGAAACGGGCATCGAAGAAGCGAAGCAGCAGTTTGAAACCAATTTCTTCGGCGTGTTGCGCGTGACGAATGCCATCCTGCCCGGAATGCGGCAGCAGGGCTTTGGGCGAATCGCCAACATCAGTTCGGTGGTCGGTTTCCTGCCCGCGCCGTATTGGGGAATCTACGCCGCGAGCAAGCACGCCGTGGAAGGATACACCGAGACGCTGGACCACGAAGTCAGGAGGTTCGGTGTGCGCGCCCTCCTGGTTGAACCGGCCTACACGCTGACCAGGCTCAATGGAAATTCCAAAACTCCGAAAATCAATCTCGAGGCTTATGCGGCGGAACGAAAGCGGGTGACGGAGCTAGCGCAACAAAACATCGAACGCGGCGACGATCCTCGAAAGGTGGCAGACGCGGTTTTGTGTGCGCTGACCGCGAAGTCACCCCGCCTGCGTTATCCGGTTGGCAAAGGAGTTTCCTTGAGCCGGCTGCGCCGTTTTGTTCCCGCCGGCATGTTCGACAAAAGTTTCCGCAAACAATTTCAACTGGATTGA
PROTEIN sequence
Length: 272
MHTPLKNKTTLVTGVSSGIGREIAQLLAAQGARVFGTVRDPQSAKSIPGVEIIRLDVTEDASVTEAIQGVTQKAGEIHILVNNAGYALTGALEETGIEEAKQQFETNFFGVLRVTNAILPGMRQQGFGRIANISSVVGFLPAPYWGIYAASKHAVEGYTETLDHEVRRFGVRALLVEPAYTLTRLNGNSKTPKINLEAYAAERKRVTELAQQNIERGDDPRKVADAVLCALTAKSPRLRYPVGKGVSLSRLRRFVPAGMFDKSFRKQFQLD*