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berkeley_reactor_200306_planktonic_scaffold_64763_13

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 21148..23829

Top 3 Functional Annotations

Value Algorithm Source
Cell surface receptor IPT/TIG domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAL4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 404.0
  • Bit_score: 203
  • Evalue 8.80e-49
Cell surface receptor IPT/TIG domain protein {ECO:0000313|EMBL:EEF63049.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 404.0
  • Bit_score: 203
  • Evalue 1.20e-48
outer membrane autotransporter barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 24.2
  • Coverage: 904.0
  • Bit_score: 125
  • Evalue 6.60e-26

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2682
ATGAACAATAGCCCAACTCTAAAAAACAAAGTAAACCGGCTTTTCAGCTTGGGTTTTCTCGCCTGTCTGCTGGCGTCCACCGCGTCGCTCCAGGCCACTGAATTGCTGCAATACAGCTTCGATGACTATACGAACACCACTTTCGCCTTGGACGGCAGTCCGAATCCTACCAACGGCTTCTTCTCTGGCACCGCCACCCGGACGACGCTGGGCAACACGCCGAACGGCCAGGGCTACGCGCTCGATGTGGTCGGCAGCAATGGCGGCAGCCAAAACTGGCTGACCGTGAGCAACTGCGACAAATTAAGTCCGGCGGTTGGTTACATCACCAACATGACCATCACATTTTGGATTAACCTTCAGGGAAATCCCGCCGCTAGCGATCGCATTCTCAGCAAGGAAGTTGTCACGCCGAAGTCCGGCTTTGGCGTGCAATTTTATGCCCCGTCCAGCGGAACCTTTGCCGCCACCAACTTTGAAATTGCTTTTGGTGCCAACACGGTCAACGGACTGAACAAGTCATATCCCTTGAACGCCGCCAACAAATGGATTTTCTGCGCTGTCACCTATGACGGCACACAGCCGGCGGGCACTACTGGCTACCAAAATTTGTTTTACTACACCGGCACGCCCAGCGCAGGAGTCTCTTTGTTGGGCACGCCTAATGTGGCCAACAATGGCTACATTACCAATGCGCCGACGGTGCCGTTGCGCATCGGCAGCACGCCGGCATCGGGCAGCGACCGCACGCCGCCGGCGTGGCTTGATGATGTGCGGGTATATGATTCCGTGCTCAGCCTGGCGCAAATCGAAACCATCCGTCAGGAAAACGCCCTGGCCAGCGTGGCCGTCAGCCTTTCCACCCCGTCCGACGTATTCGCCGGAACCAATGTCACTTTAACCGCGATTCCTTTCGGCTTAGGCAGTGAGCCGCCCACGTATCAATGGTGGTATAAAACCAATCTGATCAGCGGCGCCACCAACGCCACTTACACAATTAATGGCGTGCAGCCGGCGGATTCCGGGCTTTATGGAGTCGTTGTTTCAAACAATGTCGCCAACCCGCCACTCGTGGCTAGCGCGGCATTGAATGTTTGGGCCCAACCTTACAATCCAGATGCGCTTTCGTTGGCTTGGACCCTTGGCTATTCCCAACTGAACTATTTGACGGGATACGGATTGGATCGCAGCATGGTTTACAATGCCGCCAGCACCAACCTCATTCTCTGCCACCGTGCCAGCACGCCGTATGTAGCTGTTTTGGATCCGCTGACCGGTAACTTCAAGAGCAGCCTTGACGAAAGCGGGCTGATTAGTTTGGGCTACGCCAACCAATATGCGCTGAACCAAGTCGCCGTGGGAGATGACGGAGTTATTTACGGAGGCAACATGACGTTGGCGCCATCCTCGGTTCCTTACGTTCTTTACAGTTGGCAGAACGAAGACGCCTCCCAGGTGGCTTGTTATTATGGTGACCCCGGTGCGCCAAACTATCCCAATTTGCGCTGGGGTGACGCCATGGCGGTGCGCGGTTCGGGCGTAAACACACAAATCCTCCTTTCTTCCGCCGATGCGAACAGCAACAGCGTTGACACGGTTTTCAGTCTCCTGACAACCTCCGACGGTGTGAATTTTACCAGCCAGGCCTTCATGGTCACGAATATACCTGGAGCGTCTGCCAACGTCGGTTTGGCATGGGGTAGCGGAAACACCTTTTACGCCAAGTCTCCCGGCTTCGGTTACGCCACGGTCACCATAACCAATCAGTTTGGGGCGGTTTACACAGAATATCCTTTTACCAATCAAATGTATTATGTGCAGTTTGATACCAACAGCGGATACGGAACGGTCCTGAAAAGTTATCCCACGACGCTGGTATCCGGGAAGACGGGACCGATCGGGACAGATCTATCTTCAAACTTGCTTGCCGGACTGGAAGTTAGTCAGTCGCCCATGAATGGGTATGACTATCTGTCGCTTTACAGCATCACCGACCCAGTCAGCGGTCTGGTATTACTCGGACGGAGCGTTTTGGATTACAACACCCAAAATGGTCCGTTTGGCGGCGTTGGCGCGGTCAGCATCGGCAACATCAATGGAACCAACTACGTTTTCGTTCTGGACACGATGAACGGCATTTTTACCTACGCGATTAACAACGATTTCCTCACGCCGCCATCGCCGCCAGTCATCAGCGGGATTTCCCCGTCCACCGGCGCCACCAACGGAAATACGCTTGTAACGATCACCGGCTCCAACTTCTTGTCCGGAGTTACGGTCAATTTTGGCGGAGTCGCGGGCACGGGCGTGTCCTTGAGCGGTTCCACGAACATCAATGTCTATACGCCGCCCGGATCGCCGGGAGCCGTTGACGTTACGGTGATCAACCCCGACAGTCTCTCGGCCACCACCAGTCATGGGTTTACTTACGTGTTGCCGCCGCCGGCCGCGATGCTTGTGCCTGGCAGCACTTTCCTCTCGGGTTCGACGCTGAAAATGGTCTGGCTGGGCGGGACCAATGGCGCGTGCGAGTTGCAGTCTACCACCAATCTGACGCCGCCGGTGGTTTGGTCGCCGGTCCAGACCAATCAAGTCGGCGCCGACGGTTATTCGACTAATTCGATCAGCGTTGAAGCGGCCAAGCCGGCGCAGTTTTTCCGACTGGCGATCCCGTATAACTGA
PROTEIN sequence
Length: 894
MNNSPTLKNKVNRLFSLGFLACLLASTASLQATELLQYSFDDYTNTTFALDGSPNPTNGFFSGTATRTTLGNTPNGQGYALDVVGSNGGSQNWLTVSNCDKLSPAVGYITNMTITFWINLQGNPAASDRILSKEVVTPKSGFGVQFYAPSSGTFAATNFEIAFGANTVNGLNKSYPLNAANKWIFCAVTYDGTQPAGTTGYQNLFYYTGTPSAGVSLLGTPNVANNGYITNAPTVPLRIGSTPASGSDRTPPAWLDDVRVYDSVLSLAQIETIRQENALASVAVSLSTPSDVFAGTNVTLTAIPFGLGSEPPTYQWWYKTNLISGATNATYTINGVQPADSGLYGVVVSNNVANPPLVASAALNVWAQPYNPDALSLAWTLGYSQLNYLTGYGLDRSMVYNAASTNLILCHRASTPYVAVLDPLTGNFKSSLDESGLISLGYANQYALNQVAVGDDGVIYGGNMTLAPSSVPYVLYSWQNEDASQVACYYGDPGAPNYPNLRWGDAMAVRGSGVNTQILLSSADANSNSVDTVFSLLTTSDGVNFTSQAFMVTNIPGASANVGLAWGSGNTFYAKSPGFGYATVTITNQFGAVYTEYPFTNQMYYVQFDTNSGYGTVLKSYPTTLVSGKTGPIGTDLSSNLLAGLEVSQSPMNGYDYLSLYSITDPVSGLVLLGRSVLDYNTQNGPFGGVGAVSIGNINGTNYVFVLDTMNGIFTYAINNDFLTPPSPPVISGISPSTGATNGNTLVTITGSNFLSGVTVNFGGVAGTGVSLSGSTNINVYTPPGSPGAVDVTVINPDSLSATTSHGFTYVLPPPAAMLVPGSTFLSGSTLKMVWLGGTNGACELQSTTNLTPPVVWSPVQTNQVGADGYSTNSISVEAAKPAQFFRLAIPYN*