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berkeley_reactor_200306_planktonic_scaffold_68971_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 13407..14801

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase family 28 n=2 Tax=Rhodothermus marinus RepID=D0MEP1_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 412.0
  • Bit_score: 505
  • Evalue 4.30e-140
Endopolygalacturonase {ECO:0000313|EMBL:CDM64039.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 415.0
  • Bit_score: 506
  • Evalue 2.10e-140
glycoside hydrolase similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 412.0
  • Bit_score: 505
  • Evalue 1.20e-140

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGACCAACTATTCAGCCATTAGACGGATGGCCCATGCACCGTTGGCGCTGGCCTTGATTTTAACCGGCATTCACGCCACTTGTGCCGCGCCCAATCCAGATTCAGCCGCCTGGGATCAAGTGCCGCAAATACTTCAGCGCATCGTGCCGCCGGCTTTTCCCGAACGTTACTTCAACATCACCAATTATGGCGCGGTCGGGGACGGCAAAACGGATTGCACCAAGGCGATTTCCCGCGCGATTGATGTCTGTGAAATGGCCGGAGGCGGTCACGTCGTCGTGCCGGCCGGCACGTTCCACACGGGCGCCATCGAATTGAAAAACAACGTGGACCTGCACCTGGAGACGAATGCGGTGCTTCAATTCAGCACCGATCCGAAAGCGTATCTGCCCGTGGTGTTCACGCGGTTTGAGGGCATCGAATGCTACAACTATTCGCCGCTGATTCACGCGTATCAGGTTTCCAACATAGCCGTCACCGGCGACGGCACCCTGGACGGCCAGGCGGATGATTCCAACTGGCTGGCCTGGAAAGGACGCAAGGGCGCCAGTGATGGCACCCAAAAAGCCGCCCGCGCCCGGCTCGATAAAATGAACAACGACAACGTGCCAGTCAGCCAGCGGCGGTTCGGGGAAGGTGATTTTCTGCGGCCCGACTTTGTGGAATTCAACGCCTGCCGGAACGTTTTGATCGAGGGCGTTCACATCCGCCGCTCGCCCATGTGGGAGCTGCATCCCCTGCTCTGCACCAATGTAACCGTGCGCGGAGTGGATATTCTCTCGCACGGCGCAAACAATGACGGCTGCGATCCCGAGAGCTGCCAGGACGTGCTCATTGAGAAATGCACCTTCGACACGGGCGATGATTGCATCGCCATCAAATCCGGCCGCAACAATGATGGCCGCCGCGTCGGTGTGCCGTCGCAGGACATCATCGTGCGCGATTGCACGATGCGGGACGGGCACGGCGGCGTGACCATTGGCAGTGAAATTTCTGGCGGGTGCAGCAATGTGTTCGTGGAAAACTGCGAAATGAGCAGCCCGGAGCTCGCCTGCGTTTTGCGGCTCAAATCCAACGCCATGCGCGGCGGCGTCATTCAAAATGTTTTCGTGCGCAACGTGAAGGTGGGCCTGGTCAAGGATTCCGTGCTGCAGATTGATTTTCTCTACGAGGAAGGCCCGAACGGCGATTTCAACCCCGCCGCCCGCAACATTCAAATGGACCATATCACGGTCGCCAAAACTCCGCGCGTGCTCAATGTCCGCGGTTTCCCGGCGGCCACGATCCGGGATGTGCGCATTTACGATTCCACCTTCAAGGACATCCAGAAACCGGATGTGGTGCGGGACGCCGATGTCAAACTGGTGGACTGCAAATTGGAACCGTCCAAGTAA
PROTEIN sequence
Length: 465
MTNYSAIRRMAHAPLALALILTGIHATCAAPNPDSAAWDQVPQILQRIVPPAFPERYFNITNYGAVGDGKTDCTKAISRAIDVCEMAGGGHVVVPAGTFHTGAIELKNNVDLHLETNAVLQFSTDPKAYLPVVFTRFEGIECYNYSPLIHAYQVSNIAVTGDGTLDGQADDSNWLAWKGRKGASDGTQKAARARLDKMNNDNVPVSQRRFGEGDFLRPDFVEFNACRNVLIEGVHIRRSPMWELHPLLCTNVTVRGVDILSHGANNDGCDPESCQDVLIEKCTFDTGDDCIAIKSGRNNDGRRVGVPSQDIIVRDCTMRDGHGGVTIGSEISGGCSNVFVENCEMSSPELACVLRLKSNAMRGGVIQNVFVRNVKVGLVKDSVLQIDFLYEEGPNGDFNPAARNIQMDHITVAKTPRVLNVRGFPAATIRDVRIYDSTFKDIQKPDVVRDADVKLVDCKLEPSK*