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berkeley_reactor_200306_planktonic_scaffold_112900_5

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(3645..4427)

Top 3 Functional Annotations

Value Algorithm Source
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 248.0
  • Bit_score: 374
  • Evalue 1.20e-100
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCT8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 248.0
  • Bit_score: 374
  • Evalue 8.40e-101
periplasmic solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 239.0
  • Bit_score: 142
  • Evalue 1.50e-31

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 783
ATGATCTCCGCGCCTGAAACCGAAAACCAAGCGTTCCGGATCGGTTCGGTGAAATATCTCAACGCGGCGCCGCTGACCCACGGCATCGAGGGTGAAATCTGTTTTGCCACGCCCGCCCGCCTGGCGCAGATGCTCCGGCGCGATGAACTCGACACCGCCCTGGTCAGCATCACCGAAGTGCTGCTCAACGACCGCTACGACATTCTCGACGGCATCGCCATCGCCTCGCTGGGCGAGGTTTACAGCGTGTTTCTCGCGCACAAAAAACCGCTGGAAGCCGTGCAGGAGGTTTATTGCGACACCGCGTCGCTCACCAGCGTGAACCTGCTCAAAGTCCTGCTGGCGGAACGCGGGTTGCAGCCGGAATTCAAGCCGCTGGAAAGCTACGCCGCCGCGCGGGAAAAGGATTTCGTGCTGCTCATCGGCGACGCGGCGATTGAATTTCGGCGCGCGCCGCACGAACACGAGATTTTCGATTTGGGCTACGCCTGGCTGGAAATGACCAGACTGCCGTTTGTCTATGCCGTTTGGGCGCTGCGCCGCGGCATTGAAAATGCCGCGCTGCGGCGGCGGTTGCGCCAGACCAAACGTTTCGGCCTGGAGCGGCTCGATCACATCATCGAGACGCGTCCGGAATTCGATGCGGATTTTCGCCGCGATTATTTCGAGTGGCACATCCAATACCATCTCGGCGAGGATGAAAAACGCGCCATCGCCCGGTTTTGCGAGCTGCTGCGCAAACACCATCTCGGAACGGTTTTCGAACCGAAATTTGTCAGTTGA
PROTEIN sequence
Length: 261
MISAPETENQAFRIGSVKYLNAAPLTHGIEGEICFATPARLAQMLRRDELDTALVSITEVLLNDRYDILDGIAIASLGEVYSVFLAHKKPLEAVQEVYCDTASLTSVNLLKVLLAERGLQPEFKPLESYAAAREKDFVLLIGDAAIEFRRAPHEHEIFDLGYAWLEMTRLPFVYAVWALRRGIENAALRRRLRQTKRFGLERLDHIIETRPEFDADFRRDYFEWHIQYHLGEDEKRAIARFCELLRKHHLGTVFEPKFVS*