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berkeley_reactor_200306_planktonic_scaffold_161060_32

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(39833..41410)

Top 3 Functional Annotations

Value Algorithm Source
NodT family efflux transporter n=2 Tax=Legionella longbeachae RepID=D1RDA1_LEGLO similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 504.0
  • Bit_score: 482
  • Evalue 4.40e-133
lprN; outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 504.0
  • Bit_score: 482
  • Evalue 1.30e-133
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 523.0
  • Bit_score: 562
  • Evalue 3.60e-157

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Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1578
ATGAAATTCAAACTGGCATTTGTGGCCGCCGGACTCGCTGTGCTGGCAACTTCGTGCATGGTCGGGCCGGATTATCGCCCCCCGAAAGCCGATGTCGCCAGCCAATGGACGGCGAATTCCGCCATCACGAACCGGCCTTTCAGCGACGCGGAAATTTATTGGTGGCGCAATTTCCACGACCCGGTGCTCGACCAGCTCGTCGCCACGGCGTGCAGCAACAACCTTTCCCTGCAAATCGCCGGCGTGCGCGTTCTGGAAACCCGCGCCCGGCTGAACCGTTCCATCGGCAACTTGTTTCCGCAGCAGCAGGGCATCTCGGGCGGCGTGAATTATTCGCAATTGAACAGCGCGCTTGCGTCGAAAATTCCCGGCGTGAATCCCGACTATGTGTCGGATCAAATCCTGTTCGGCGCCAATTGGGAGATTGATTTCTGGGGCAAATATCGCCGCATGATCCAGTCCGACCGCGCGAATTATCTCGGCACCCTCGCCGATTACGACAACGCGATGGTCACGCTCATCGCCGATGTGGCGAGCACTTACGTGAACATCCGCACGCTGGAAACGCGCCTCAAGGTCGCGAATCAAAACCTGGCCACCCAGCGCGAAGGTTTGCGCATCGCGTCGGCGCAGTTCCGGGCCGGGGAAACCAGCGAACGCGACGTGCAGCAGGCCACGACGCGACTGGCACAGACCGAGGCGCAGATTCCGCTGCTCAACGCCGCGCTCGCGCAAAACCAAAATGGCCTCGCGTTGTTGCTGGGCGAAACGCCGGAACAAGTCGGCCGGCATTTGACCGGGCCGGAAGTCATTCCCACGGCGCCGGCCGACGTGGCGGTGGGCATTCCGAAAGATTTGTTGCGGCGTCGTCCGGACGTGCTGGCGGCGGGATTGCAGGCGGCTTCGTATTCGGCGCTTATCGGCGTGGCCAGGGCGCAGATGTATCCGGCCTTTTCGTTGTCGGGCGAATTCGGTTACGGCTCCGATAACCAGTTCAACAACCATCTCAGCGACTTGTTCAACTGGCAGAATCGCGTGGTGAACGCCGGCGCGGGCGTGGTGTTTCCCATTTTCAATTACGGCCGGCTCGTCAACCAGGTGCGGGTGCAGGACGCGCAGTTCGAGCAGGCGTTGTTGAATTATCAAAACACGGTGCTGACCGCGCAGCAGGAGGTCGAGAACGGTCTGGCGAATTTTGCCAACCAGCAAACCGCGCTGGTTTCGTTGAACCAGGCGGCGGCGGCGGCGCGACGTTCCACCGCGCTGGCGATGATTCAATACAAGGAAGGCCAGACGGATTTCACCACCGTGCTGACGGCGGAGCAGGAGCAATTGAACGTGGAAAATGATGTTGCTGCCACGCAGGGCAACGTGGTGCTGGGGCTGATCTCCGTTTATCGCGCGCTCGGCGGCGGCTGGCAGATTCGCGATGGGCATGATGTGATTTCCGACCGGGTCAAAGCCGAGATGGCGCAGCGCACGAACTGGGGCCGGATGCTGGCGCCGGCGAATCATTTGCCGGCCTCGGACCAGGCCATGACCGGGAACGTGCAGGGGAACGCAGCGAAAAGTGAATAG
PROTEIN sequence
Length: 526
MKFKLAFVAAGLAVLATSCMVGPDYRPPKADVASQWTANSAITNRPFSDAEIYWWRNFHDPVLDQLVATACSNNLSLQIAGVRVLETRARLNRSIGNLFPQQQGISGGVNYSQLNSALASKIPGVNPDYVSDQILFGANWEIDFWGKYRRMIQSDRANYLGTLADYDNAMVTLIADVASTYVNIRTLETRLKVANQNLATQREGLRIASAQFRAGETSERDVQQATTRLAQTEAQIPLLNAALAQNQNGLALLLGETPEQVGRHLTGPEVIPTAPADVAVGIPKDLLRRRPDVLAAGLQAASYSALIGVARAQMYPAFSLSGEFGYGSDNQFNNHLSDLFNWQNRVVNAGAGVVFPIFNYGRLVNQVRVQDAQFEQALLNYQNTVLTAQQEVENGLANFANQQTALVSLNQAAAAARRSTALAMIQYKEGQTDFTTVLTAEQEQLNVENDVAATQGNVVLGLISVYRALGGGWQIRDGHDVISDRVKAEMAQRTNWGRMLAPANHLPASDQAMTGNVQGNAAKSE*