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berkeley_reactor_200306_planktonic_scaffold_158606_2

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(1787..2857)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J085_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 349.0
  • Bit_score: 501
  • Evalue 6.20e-139
CRISPR-associated protein Cas4 similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 349.0
  • Bit_score: 501
  • Evalue 1.80e-139
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 346.0
  • Bit_score: 619
  • Evalue 2.20e-174

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Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1071
TTGGAAGCGCTGGATTTTGCCGCCGAATCTTCGGACAAGGAACCGACCTTGCAGCCGCCGCGTCCGGGTGGTGATGACGGCGAGGTGTTGGTGGTGCAAACGCCTGGCGCTCAAATCGGCCAGCGCGGGGATGAATTGCTGGTGAGCGTTAAAGGCGAGAACGTGCGCAAATTGCCCGGCCAGCAGGTGCGCGCAATTTATTGTTACGGCGCAGTGCAGATGACGGCGCAGGCGGTTTCCACCTGTTTGGAGCTTGGCATTGATGTTTCCTATTTTTCACCGGCGGGACGGTTTCTCGGTATGTTGGGCGGATTGCCTGCCAGCGGCGTGGATGCGCGGCGCGGACAGTATCGGCTGTTTGAACTGCCGAGCGTGCGCCTGCAACTGGCCCGCGAAATCATTCGCGCCAAAATCCACAATCAACGCGTGATGTTGATGCGCAATGGCGATGTGCCCGACCGCGTGACCAGCTTGATGGCAGGCTTTCGTGATGCCACGGAATCGGCGCGCGACATTACTTCGTTGATGGGCATCGAAGGCAGCGCGGCGGCACTGTATTTCGAGCAATTCGACACGATGCTGAAACAGCGCACGGATTGGAAATTCGACTGGCGCGGGCGCAATCGCCGTCCGCCGCGTGATCCGGTGAATGCGTTGCTGTCGCTCGGTTATTCCATGCTGGCAAAGGAATTGACGGGTGTTTGCTATTCGGTGGGGCTGGACCCGTTTCTTGGTTTCATGCACCAGCCGCGCTACGGGCGCCCGGCGCTGGCGTTGGATTTGATGGAGGAGTTTCGTCCGCTTATCGCGGACAGCGTGGCCATCAGCTTGATCAATCGCGGCGAACTTGGCCCGGAAGATTTCATCCGCAGCGCGAACGGAACATTTTTGACCGACAAAGGACGCCGGCCATTTTGGGAATCGTGGTTTCGGCGGCTGGACGCGGAAGTGAGTCACCCGGAATTCAGCTACAAAATGGCTTATCGCCGAATGTTGGAGGTGCAGGCGCGGCAGTTGTGGCGTTACGTGCGCGGCGAGGCGCTGACTTATCACGGATTCACGACAAGATGA
PROTEIN sequence
Length: 357
LEALDFAAESSDKEPTLQPPRPGGDDGEVLVVQTPGAQIGQRGDELLVSVKGENVRKLPGQQVRAIYCYGAVQMTAQAVSTCLELGIDVSYFSPAGRFLGMLGGLPASGVDARRGQYRLFELPSVRLQLAREIIRAKIHNQRVMLMRNGDVPDRVTSLMAGFRDATESARDITSLMGIEGSAAALYFEQFDTMLKQRTDWKFDWRGRNRRPPRDPVNALLSLGYSMLAKELTGVCYSVGLDPFLGFMHQPRYGRPALALDLMEEFRPLIADSVAISLINRGELGPEDFIRSANGTFLTDKGRRPFWESWFRRLDAEVSHPEFSYKMAYRRMLEVQARQLWRYVRGEALTYHGFTTR*