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berkeley_reactor_200306_planktonic_scaffold_158606_11

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(14343..15194)

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054019};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 284.0
  • Bit_score: 328
  • Evalue 4.70e-87
Formamidopyrimidine-DNA glycosylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRC9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 284.0
  • Bit_score: 328
  • Evalue 3.40e-87
mutM; formamidopyrimidine-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 286.0
  • Bit_score: 209
  • Evalue 1.10e-51

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 852
GTGCCAGAACTGCCGGAAGTCGAAGTGCTCGCCCGCCATCTCCGCCCGGTTTTGCTCGGCAAAACCATCCTCGACGTGGAGGTGCGCCGGGCGAAAGTTATCCGGCCCACCGAAGAACGCGCATTGAAACGCGTGCTGACCGGCGCGAAATTCAGCGGCCTCTCCCGGCGCGGCAAATATCTGCTGTTCGATTTGCGTTCCCCGGCGCCCGGGCGAAACGTCACCGTCCTCGGCCATCTTGGCATGAGCGGACGCATGTTTGTCGCCCGCCGGGGCGCGGCCTGGCCGAAACATGCGGCGGTGGTGTTGAAGTTGACCGGCGGCGATTTCATCTACGAAGACACCCGGTATTTTGGGCGGTTCACCTTGGATTTGACGCCCGTGGCGGAACTGGGCCCGGAGCCGCTGGATGACAGCTTTCCCCTCGACGACTTTGCCCGGAATCTCAAACGCTCGCGCCAGCCCGTCAAAGTAAAACTGCTTGATCAATCTTTGATCGCCGGCGTGGGAAACATTTACGCCAGTGAAGCCTTGTTTCGCGCCGGTATTTCGCCAAAACGTGCGGCCAATCAACTTTCGAAGCCCCAGACGCGAATCCTCCACCAAAGCATCCGGGCGGTTTTGACCGAGGCCATTGACTGCGGCAGCACGGTGCCCCTCAATTTTGGCGCGGGAAAAACGGATGGCTTATTTTATTTCGGCCGGGCCGCTGGCGCGCCGGATTATTACGAAGAACGATTGCAGGTTTATGATCGGGCCGGAAAACCCTGCCTGAAATGCGGTTCACCGATTCGGCGTCTGGTTCAGGCGGCACGCAGCACGTTTTATTGTCCGCGTTGCCAAAAAAGTTGA
PROTEIN sequence
Length: 284
VPELPEVEVLARHLRPVLLGKTILDVEVRRAKVIRPTEERALKRVLTGAKFSGLSRRGKYLLFDLRSPAPGRNVTVLGHLGMSGRMFVARRGAAWPKHAAVVLKLTGGDFIYEDTRYFGRFTLDLTPVAELGPEPLDDSFPLDDFARNLKRSRQPVKVKLLDQSLIAGVGNIYASEALFRAGISPKRAANQLSKPQTRILHQSIRAVLTEAIDCGSTVPLNFGAGKTDGLFYFGRAAGAPDYYEERLQVYDRAGKPCLKCGSPIRRLVQAARSTFYCPRCQKS*