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berkeley_reactor_200306_planktonic_scaffold_158606_47

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(53795..54910)

Top 3 Functional Annotations

Value Algorithm Source
High-affinity nickel-transporter n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC85_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 395.0
  • Bit_score: 426
  • Evalue 2.00e-116
High-affinity nickel-transporter {ECO:0000313|EMBL:EDY15962.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 395.0
  • Bit_score: 426
  • Evalue 2.90e-116
rcnA; efflux nickel/cobalt protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 377.0
  • Bit_score: 417
  • Evalue 2.70e-114

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1116
ATGGCTTCATTCAATGAGTATTTGGCTCACGGCAACGCCTGGCTGTTCATTCCCGGCGCAATTCTACTTGGCGCGCTGCATGGCTTGGAACCGGGACATAGCAAGACGATGATGGCTGCATTCATTGTCGCCATTCGCGGCACGATCAAACAGGCGGTGCTGCTCGGTGTGTCAGCCACGGTTTCCCATACGGCCATCATCTGGGTTCTGGCCTTGATCGGATTGCATTATGCCGGAAGATTCAATGTCGAAACCACCGAACCCTATTTTCAAATTGCAACAGGTGTCCTTGTGATTGGGATGGCGATTTGGATGTTCACGCGCACGCGCCGGGAAGGTCACGCCGCCGGGCATCATCATCACGATCACGACCTTAACCACGGCGCACACGGCGGCGTCATGCTCGATACCGGGCATGGCTTCGTGGAGGTCAGCGTGTTTGAGACAAACGTGCCGCCGCATTTCCGGCTCCACTTCTTTGACCAGAACAAACGACCATTGCCTTGCCCGAACAACGAAACAGTTTCCATCGAGACTGTTCGTCCCGATGGCGCGCGGCAAATTTTCGCGTTCCGTCGCGTGGAAGATTTTCTTCAATCCACGACCGACATCCCCGAACCGCATGAGTTTCGTCTGTGCTTGAAACTGGCGCATGGCGACCACGCCCACACCTTTGAAACCGAGTTTGCGGAAAGTCATCACCACCATCACGAGCACGATTCGACGAGTGAGGATTTTGAGGACGCGCACCAGAAGGAGCACGCCGAAGAAATCGAGAAGCGCTTCGCCAACCGGCAGGTGACGACCGGCCAGCTCATCCTGTTTGGACTGACGGGTGGATTGCTTCCCTGTCCCTCGGCGTTCGCGGTGCTGGTGATTTGTCTCCAACTCAAGCAATTCACTTTGGGCTTTGCGATAGTGCTGGCGTTCAGCTTGGGACTGGCAATTACCCTTGTCACCGTCGGTTCGGTAGCGGCCTTTTCTGTGCGGCACGCCAGCAAACATTTCAAAGGATTTGGCGAAATTGCCCGCAAAGCACCCTATATCAGTTCCACCGTCCTGGTGTTAATTGGACTCTATGTTGCGATCTTGGGATTCAAAACCTTGTTGCGCTGA
PROTEIN sequence
Length: 372
MASFNEYLAHGNAWLFIPGAILLGALHGLEPGHSKTMMAAFIVAIRGTIKQAVLLGVSATVSHTAIIWVLALIGLHYAGRFNVETTEPYFQIATGVLVIGMAIWMFTRTRREGHAAGHHHHDHDLNHGAHGGVMLDTGHGFVEVSVFETNVPPHFRLHFFDQNKRPLPCPNNETVSIETVRPDGARQIFAFRRVEDFLQSTTDIPEPHEFRLCLKLAHGDHAHTFETEFAESHHHHHEHDSTSEDFEDAHQKEHAEEIEKRFANRQVTTGQLILFGLTGGLLPCPSAFAVLVICLQLKQFTLGFAIVLAFSLGLAITLVTVGSVAAFSVRHASKHFKGFGEIARKAPYISSTVLVLIGLYVAILGFKTLLR*