ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_204825_71

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 79475..79897

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator NarP {ECO:0000313|EMBL:EXI73403.1}; Flags: Precursor;; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 129.0
  • Bit_score: 96
  • Evalue 2.00e-17
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=3831524 bin=GWF2_Planctomycetes_42_9 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes similarity UNIREF
DB: UNIREF100
  • Identity: 34.1
  • Coverage: 123.0
  • Bit_score: 79
  • Evalue 1.80e-12
LuxR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 119.0
  • Bit_score: 76
  • Evalue 4.20e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Accumulibacter sp. SK-11 → Candidatus Accumulibacter → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGATTCAGAACTCCATCAAGTGCGTGGTGCTGGCCGACCGCCATCATGGTTTGACCGAAGGGATTCGCTCCTTGCTGGAGACCAAGTTTGACGCGGTGGTGATGGTGGCGGACGAAACTTCCTTGACCGAGAGTGCCGCCCGTCTGCAACCGAGCGTGGTGGTGGCGGATCTGGCGCTGGCCCGGGGAGAAAACTTTGGCTGGCTTCACCGGCTGCTGGCGCGTTGTCCAAACGCCCGGGTGGTGGTGCTCAGCGCGCATGACGAAAAGGTGGTGGAGGAGCAGGCCCTGGCCGCCGGCGCCGTGGGCCTGGTGCGCAAACGCGAAATTGCCACGCGGCTGCTGCCCCTGCTGGAAACCATCCTGGCCGGCGATCCGCCGGGCACCGGCCACTCGCCGATGAAAAAAACAACGGATGGCTGA
PROTEIN sequence
Length: 141
MIQNSIKCVVLADRHHGLTEGIRSLLETKFDAVVMVADETSLTESAARLQPSVVVADLALARGENFGWLHRLLARCPNARVVVLSAHDEKVVEEQALAAGAVGLVRKREIATRLLPLLETILAGDPPGTGHSPMKKTTDG*