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berkeley_reactor_200306_planktonic_scaffold_226867_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(29043..30017)

Top 3 Functional Annotations

Value Algorithm Source
Transketolase central region n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9V6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 323.0
  • Bit_score: 580
  • Evalue 9.60e-163
Transketolase central region {ECO:0000313|EMBL:EEF63297.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 323.0
  • Bit_score: 580
  • Evalue 1.30e-162
transketolase central region similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 324.0
  • Bit_score: 469
  • Evalue 6.80e-130

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 975
ATGCCTGTCATCACTTATCGTAAAGCCTTGAACGACGCTCTGGCAGAGGAACTGGCGCACGACGAAAATGTCGTCATTATCGGCGAAGAAGTCGCTCAATACAACGGTGCTTACAAGGTAACCGAGGGGTTATGGAAGCGATTCGGGGACAAGCGCGTCGTGGATGCCCCCATCAGTGAAGCCGCCTTCATCGGTTTGGGCGTCGGCGCGTCCATGCTTGGACTTCGGCCCGTGATGGAACTGATGTTTTGGAGCTTCGCGTTCGTAGCCTACGATCAAATTGTCAACAACGCCGGTTGCATCCGTTACATGTCCGGCGGACTGGTCAATTTGCCCATCGTCATTCGTGGCCCGGCCAATGGTGGCACTGGCGTTGGCGCCACGCACTCGCACACTCCGGAAAACATTCTGGCCAACAATCCGGGCGTGAAGGTGGTGTGTCCCGCCACGGCCTACGATGCCAAGGGGCTGATGAAAACGGCCATTCGGGACAATGATCCTGTGTTTGTGATGGAGAATACATTGTTGTATGGCGAAACCTGGGAAGTGCCGCAGGAGGAATATCTCATTCCGCTGGGCGTTGCCGACCTGAAACGGGAAGGCTCCGACATCTCGCTAATCGCGCACGGTCGCGCTGTGATCACCAGCTTGAAAGCGGCGGAAATTTTGTCGAAGGAACATAATGTCAGCGCCGAAGTCGTGGACTTGCGTTCCATCCGGCCGCTGGACGAGGAAGCCATTCTACAGTCGGTTCGCAAAACGCATCGGGCTGTGCTGGTGGATGAAAATAAACCTTTCTGCGGGGTGAGCGCCCAGATTGCCGCGACGATTCAAGAGAAGGCGTTTGACGATCTGGATGCGCCCGTTCAACGCGTTTGCACGTTGGACGCGCCCGCCATTTACAGTCCGTTGTTGGAAAAAATGCAACTCCCCACTCCGGAGCGCGTCGTGGAAAAAGTTTTAAGCATCCTTTGA
PROTEIN sequence
Length: 325
MPVITYRKALNDALAEELAHDENVVIIGEEVAQYNGAYKVTEGLWKRFGDKRVVDAPISEAAFIGLGVGASMLGLRPVMELMFWSFAFVAYDQIVNNAGCIRYMSGGLVNLPIVIRGPANGGTGVGATHSHTPENILANNPGVKVVCPATAYDAKGLMKTAIRDNDPVFVMENTLLYGETWEVPQEEYLIPLGVADLKREGSDISLIAHGRAVITSLKAAEILSKEHNVSAEVVDLRSIRPLDEEAILQSVRKTHRAVLVDENKPFCGVSAQIAATIQEKAFDDLDAPVQRVCTLDAPAIYSPLLEKMQLPTPERVVEKVLSIL*