ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_208745_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(5037..5312)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AB-629-E09 RepID=UPI000368642C similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 79.0
  • Bit_score: 97
  • Evalue 4.10e-18
flagellar motor switch protein FliN similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 90.0
  • Bit_score: 94
  • Evalue 9.70e-18
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 79.0
  • Bit_score: 96
  • Evalue 1.30e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF02_62_27 → RIF2 → Bacteria

Sequences

DNA sequence
Length: 276
ATGAACGCCACTGTTGAAAATCCCGCCAACCTGAATCTCGTGCTCGACGTGCCCGTGAGCCTCACCATCGAACTGGGCGCCTGCCAGTTGCCGATGCGCGAAGTGCTCCAGCTCAACATCGGCTCGGTCGTCCAGCTCGACAAGCCCGCCGACGCGCCGGTGGAACTGAGCGTCAACGGCAAGCTGATCGCCCGCGGCGAAGTCGTGGTCATCGAAGACCGTTTCGGCGTGAAAATCACCGAAGTCATCGGCGGCACCACCACCGCCACGGCTTGA
PROTEIN sequence
Length: 92
MNATVENPANLNLVLDVPVSLTIELGACQLPMREVLQLNIGSVVQLDKPADAPVELSVNGKLIARGEVVVIEDRFGVKITEVIGGTTTATA*