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berkeley_reactor_200306_planktonic_scaffold_228973_11

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(7793..8740)

Top 3 Functional Annotations

Value Algorithm Source
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 315.0
  • Bit_score: 414
  • Evalue 1.20e-112
Methionyl-tRNA formyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 315.0
  • Bit_score: 414
  • Evalue 8.90e-113
fmt; methionyl-tRNA formyltransferase similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 314.0
  • Bit_score: 334
  • Evalue 3.30e-89

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 948
ATGTCCCCGCTGCGGATCATCTTCATGGGCACGGCGGAACTCTCCGGTGCCAGTCTCGAAAAACTCGCGGCCGACCGCCGTTTCCAAGTCGTTGCGGTCGTCACCCAGCCGGACAAGCCGAAAGGCCGCGACCTCAAACTCACGCCGTCGCCGGTCAAAGTTCTGGCTGAAAAACTAAATTTGCCCGTGCTGCAGCCGCTCAAGGCGCGGGAGGAAAAATTCATCGCCGAACTGCGCGCCTTAAAACCCGATCTGATCGTCGTGGTCGCCTACGGGCAAATCCTGCCGCAAGCCTTGCTGGACGTGCCGCCGCACGGCTGTATCAACGTTCACACCTCGCTGCTGCCGAAATATCGCGGCGCCGCACCGATTCAATGGGCCATCGCCGACGGCAACGCCGAAACCGGCGTGACCCTCATGCAGATGGACGCCGGACTCGACACCGGCCCGATTCTGGCTACGCGCCGCACGCCCATTTTGCCGGCAGACGATTCGCAAACGTTGCACGACCGGCTGGCGCAACTGGGCGCGGAATTGCTGGTGGAAACGCTTCCGGATTACATCAGTGGAAAAATTCAGCCGCAGCCGCAGCCGGCGGAAGGCTCGACTTACGCGGCGAAAATCCGGAAGGAGGACGGTAAAATTGAATGGAATCAGCCGGCGGAAAGCATCTGGCACCGGCTGCGCGCTTTTACGCCCTGGCCGGGCGCGTTTACGTTTCTGCCGGCGGAAGGCAAATCGCAATTGCTGAAAATCTGGCAGGCCATGCCGGTGGAAAGAACCGGCCGGTCAGGGGAGATTTTGGCCGCCGATAAATCCGGTATCGTGGTCGCCTGCGGGCACCATGCACTGCGCATTCTCGAACTCCAGCGCGAAGGCGGGAAACGATTGACGGCGGAGCAGTTTCTGGCCGGGCATCCGTTAAAGCCGGGAACGAAGTTGCAGTAG
PROTEIN sequence
Length: 316
MSPLRIIFMGTAELSGASLEKLAADRRFQVVAVVTQPDKPKGRDLKLTPSPVKVLAEKLNLPVLQPLKAREEKFIAELRALKPDLIVVVAYGQILPQALLDVPPHGCINVHTSLLPKYRGAAPIQWAIADGNAETGVTLMQMDAGLDTGPILATRRTPILPADDSQTLHDRLAQLGAELLVETLPDYISGKIQPQPQPAEGSTYAAKIRKEDGKIEWNQPAESIWHRLRAFTPWPGAFTFLPAEGKSQLLKIWQAMPVERTGRSGEILAADKSGIVVACGHHALRILELQREGGKRLTAEQFLAGHPLKPGTKLQ*