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berkeley_reactor_200306_planktonic_scaffold_269654_11

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 11227..12081

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 281.0
  • Bit_score: 398
  • Evalue 9.80e-109
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 281.0
  • Bit_score: 398
  • Evalue 4.90e-108
Diaminopimelate epimerase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IZQ9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 281.0
  • Bit_score: 398
  • Evalue 3.50e-108

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Taxonomy

Opitutaceae bacterium TAV5 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 855
ATGAATTTTGCGTTTACGAAATACCACGCGCTGGGCAACGACTACATCGTCATCCACCCGAAAGATTTAACCGCGCCGCTCACGACCGAACAGGTCAAGACCATCTGCCATCGCAACTTTGGCGTTGGCTCGGACGGCATTTTGCTGGGACCGCTCCCGGCGGAAAACGCGAAGTGTGCGCTGAAAATTTACAACCCTGACGGCAGCATCGCCGAAAAAAGCGGCAACGGGTTGCGCATCTTCTCGCGCTATCTCTGGGACACAAAATTCGTGGGCAACGATGAGTTTGCCATCCAGACCGACGGTGGTTTGGTGCGTTCCACCGTGTTTGAAAACGGCTCCATGGTGCGGGTGGAAATGGGCAAGGTCAGTTTCGACAGCGAAATTATTCCGGTCGTCGGCGCCAAGCGCGAAGTCATCAACGAAAAGATCACCGTGGGCGGACGCGAATTCACCTTTTGCGCGGCGACCATCGGCAATCCGCATTGCGTCCTGCCCCTTTCGGAAATCAGCGCGAAACTGGCGCACGAATTTGGTCCGCTGCTGGAAGTGCATCCGAATTTCCCACGCAAGACCAATGTGCAATTTCTCAAGGTGCTCGATCGCGCTAACATTCAGATTGAAATCTGGGAACGCGGTGCCGGCTACACGCTCGCCAGCGGCAGCAGCAGCAGCGCGGCGGCGGCGGTGGCGCACAAGCTGGGCTTGGTGGATCGCGATGTCACCGTGCATTGTCCCGGCGGACTCATCAAAATCGAAATCGGCGACAACTTCGCCATCCGCATGACCGGCAGCGTGACCCGCGTTTCCGAAGGCGTCATTTCACCGGAAATCTTCATGGTCAAGTTTGATTAA
PROTEIN sequence
Length: 285
MNFAFTKYHALGNDYIVIHPKDLTAPLTTEQVKTICHRNFGVGSDGILLGPLPAENAKCALKIYNPDGSIAEKSGNGLRIFSRYLWDTKFVGNDEFAIQTDGGLVRSTVFENGSMVRVEMGKVSFDSEIIPVVGAKREVINEKITVGGREFTFCAATIGNPHCVLPLSEISAKLAHEFGPLLEVHPNFPRKTNVQFLKVLDRANIQIEIWERGAGYTLASGSSSSAAAAVAHKLGLVDRDVTVHCPGGLIKIEIGDNFAIRMTGSVTRVSEGVISPEIFMVKFD*