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berkeley_reactor_200306_planktonic_scaffold_255293_5

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(5208..7307)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA helicase RecG n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRJ4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 697.0
  • Bit_score: 817
  • Evalue 7.70e-234
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EEF57565.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 697.0
  • Bit_score: 817
  • Evalue 1.10e-233
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 670.0
  • Bit_score: 506
  • Evalue 6.30e-141

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2100
ATGCCAGCGCCGGAAACCAATTCCCAGCCCGGGCCGCCAGCCGCGCCCGTTCGCGGCGACGCGGCCGCCTCCGCGTTGCGCATGCCCGTCAGTTGCGTCCGGGGCGTCGGCGAGGAACGCGCCAGACTGCTTGCCAAACTCGAAATTTTCACCGTTGAAGATTTGCTGCTGCACCCGCCCCGGCGCTATGAGGACCGCCGAAAGTTTCTTCCCATCCGCGATTTGCAATTGAAGGAACCGGCGACGGTGCGCGGCAAAATCGTCGCCGCCGGCGTCAAACGCTTCAAGCAGGGCGCCCGCGCCCTGTTTGAATGTGTGTTCGAGGACGGCACGGCGCGGTTGCATTGCCGCTGGTGGCAGGCGCAACCGTGGATGCCGGACTGGTATGCGGTGGGGCGCGAATTTCTCATCTACGGCAAGCTGGACGACGACAAAAAGCCGCGCACGTTCACGCATCCCGAGACGGAATTGGTCGAGCCGGGCGACGACGAATTCATCCATGTCAACCGCATCGTGCCGGTGCATCCGCTCACGGAAGGGCTGACCGCGCGGGTTATGCGCACGCTGGTCTGGCGGGCGCTGGAACAGTTTGAAAGCCAAATCGAGGAACCGCAACTCGGCGGGCCGGCGGCGCGCCCGGCTTTGAACTCGGAGGTTCTGTTCCAACCAGCCGGCAACCCCGCCTGGCCATCGCGCGCCAGCGCCGTGCGCGGCATTCATTTCCCGGCGGCGTTGGCGGACGCGGAAATCGCGCGGCAACGGCTGGCGTTGGACGAGTTTGTGGCCTTGCAATGGCAGATTCAGTCGCGCCGGAAAAAGTTTGAGGCCAGCGCGAAAGCCCTGCCGTGCGGCGGCGACAACCATTTGATGAAGCCGTTCCTGGCCCGGCTGGGTTTCAAGCTGACCGAAGCGCAGACGAAAGTTCTCCGCGAGATCCGCCTGGACCTGGGCGGCGCGCATCCGATGCGGCGCCTGTTGCAGGGCGATGTCGGCTCCGGCAAAACCGCCGTCGCCGCCTGCGCGGCGTTGATGGCGTTGGAGAGCGGTTTCAACGCCGCCTTGATGGCGCCCACGGAGATTCTGGCGGAACAGCATTTCCGGAATTTTGAAAAGTGGTTCAGCCCGCTTGGCGTGCAGATCGAACTTCAAACCGGAAGCCGGAAAACCGCCGCCAGCCATCCGCCCGCGGCTTCCGCCTCCCTGGTCATCGGCACCCACGCCCTGCTGGCCGGCGGCTTTGATCTGCCGAAACTCGGCCTGGTAATCATTGATGAACAGCACAAATTCGGCGTGGCGCAACGCGAGACGCTGGTGCGCAAGGGAAATTATCCGCATCTGCTGGTGATGACGGCCACGCCCATTCCGCGCTCGCTCGGGCTCACGCTCTACGGAGACATGGACGTGTCGGTGATTGACGAATTGCCCGGTGGCCGGGGACGAATCAAAACGTTTCTGCGTCCAACGGGAAAGCTGCCGAAGGTGTTTGAATTCATCCGCGAAAAAATGGCCGCCGGCCGGCAGGCTTACATCGTCTATCCGCGCGTGGATGCGGCGGACACGGACAAGGACATCAAGGCCGTGACCAGGGAATTTGCCGGCGTGCAACAGGCATTGTCCCCCTTCAAAACCGGCCTGCTGCACGGGCGCGTGAAGGCGGCGGACAAGGCGGCGGTGATGGCGGATTTTCGCGCCAACCGCCTCCAGGCGCTGGTCGCCACGTCACTGATCGAAGTGGGCGTGGATGTGCCCAACGCGAGCGTGATACTCATCGAAAACGCGGAGCATTTCGGCCTGGCGCAGTTGCATCAATTGCGCGGGCGCATCGGGCGCGGGGCGCATGAAAGTTTTTGCATTCTCATTTCCGACGCGCAGCATGATCACGCGCAGTCGCGCTTGAAAATTCTGGAGGAGACGAACGACGGGTTCAAAATCGCCGAGGCGGATTTGCGCTTGCGCGGCCCCGGCGAACTGCTCGGCCAGCAGCAGAGCGGCGCGATGAAACTGCGGTTCGGCAACCTGGTGGAAGACTTGAACCTGATCCGCCGGGCGAAGGAATTGGTCGCGAAATCCCTGCGCGCGCCGGCCGAAAACCGCGTTTGA
PROTEIN sequence
Length: 700
MPAPETNSQPGPPAAPVRGDAAASALRMPVSCVRGVGEERARLLAKLEIFTVEDLLLHPPRRYEDRRKFLPIRDLQLKEPATVRGKIVAAGVKRFKQGARALFECVFEDGTARLHCRWWQAQPWMPDWYAVGREFLIYGKLDDDKKPRTFTHPETELVEPGDDEFIHVNRIVPVHPLTEGLTARVMRTLVWRALEQFESQIEEPQLGGPAARPALNSEVLFQPAGNPAWPSRASAVRGIHFPAALADAEIARQRLALDEFVALQWQIQSRRKKFEASAKALPCGGDNHLMKPFLARLGFKLTEAQTKVLREIRLDLGGAHPMRRLLQGDVGSGKTAVAACAALMALESGFNAALMAPTEILAEQHFRNFEKWFSPLGVQIELQTGSRKTAASHPPAASASLVIGTHALLAGGFDLPKLGLVIIDEQHKFGVAQRETLVRKGNYPHLLVMTATPIPRSLGLTLYGDMDVSVIDELPGGRGRIKTFLRPTGKLPKVFEFIREKMAAGRQAYIVYPRVDAADTDKDIKAVTREFAGVQQALSPFKTGLLHGRVKAADKAAVMADFRANRLQALVATSLIEVGVDVPNASVILIENAEHFGLAQLHQLRGRIGRGAHESFCILISDAQHDHAQSRLKILEETNDGFKIAEADLRLRGPGELLGQQQSGAMKLRFGNLVEDLNLIRRAKELVAKSLRAPAENRV*