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berkeley_reactor_200306_planktonic_scaffold_255293_30

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(32233..33129)

Top 3 Functional Annotations

Value Algorithm Source
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GCU8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 31.7
  • Coverage: 167.0
  • Bit_score: 72
  • Evalue 6.00e-10
Uncharacterized protein {ECO:0000313|EMBL:KHD05565.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.6
  • Coverage: 206.0
  • Bit_score: 84
  • Evalue 2.80e-13
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 103.0
  • Bit_score: 67
  • Evalue 7.10e-09

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Taxonomy

Candidatus Thiomargarita nelsonii → Thiomargarita → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGACTCCGTTCTGGATTTTATTAATCCTGATTCTCACCGCGCTGGCCTTGCCGGCGGCGGAGGCGAAGAAATCCGGGCTGTGGTTTTTTGTTGCCGCCGCGCTCTCATTCTTGGTGGTGGTGCTGCCGTTGTTCGTCTTCTTTTTCAGCGCCTTCATGGTGCCGGAGTGGAAGGGAGCCTGCGCGCAAGGCTGGGTGGATTGTTTCATTGTCGGCAAACTGGGATTAACACCTTTGGTTTTGGCGGCAACGGCCGCCTTGTATCGGGTGGAAGTGCTGCGGGACAACCAGAATCCGAAACCGTGGATCGTCGTGGCCATCTTCCTGGGAGCGCTGATCGCCACCGTTTGCGTGATATTCGGACTGATTTGTTTGCCCTGGCAAAGATGGATGCTCGTGCCGATCTATGTCGCCATCTGGTATGCCATTCGTTCGGTGCACTTGATTGCGACCTCGCACTTCGGCTTGAAACCCTATTTGGTTGGACTGCTCGGGACATTCCCGTTCTGGCTGATCAGCGGCGTCTGGTCGCGCGGGCTCTTTGACACATTGCCCGACAAAGCGCCCACCGGTTGTTTTATTGTTACCGCCGCCAGTCGCGGACATCCCCGCTGCGTCGGGCCGTTTGTAGAAGTTTTTCGCCATGGCCGGCCCCTGCGCGCCAACCATCAATTGATCGTCTTCTGGCAGTTTGAAGATCGCTGGCGAAAAGCCGCTCCGCACAGCCACACCCTTTGCCGCAAACTTTACAACCGCGCGGGGCCGGTAATCGCCAGCCGTATCCGGTCGCCGTGGCTGGCGGACCTGGTTTATCTGAGTTTGAAACCGCTGGAACTTCTCCTCCGGCAAATCAACCACCAAACAAAGGAACGTTATGCACCACGCCAAATGGATTGA
PROTEIN sequence
Length: 299
MTPFWILLILILTALALPAAEAKKSGLWFFVAAALSFLVVVLPLFVFFFSAFMVPEWKGACAQGWVDCFIVGKLGLTPLVLAATAALYRVEVLRDNQNPKPWIVVAIFLGALIATVCVIFGLICLPWQRWMLVPIYVAIWYAIRSVHLIATSHFGLKPYLVGLLGTFPFWLISGVWSRGLFDTLPDKAPTGCFIVTAASRGHPRCVGPFVEVFRHGRPLRANHQLIVFWQFEDRWRKAAPHSHTLCRKLYNRAGPVIASRIRSPWLADLVYLSLKPLELLLRQINHQTKERYAPRQMD*