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berkeley_reactor_200306_planktonic_scaffold_311853_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(658..2298)

Top 3 Functional Annotations

Value Algorithm Source
60 kDa chaperonin n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEG5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 550.0
  • Bit_score: 893
  • Evalue 8.70e-257
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 550.0
  • Bit_score: 893
  • Evalue 1.20e-256
groEL; chaperonin GroEL similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 546.0
  • Bit_score: 853
  • Evalue 2.80e-245

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1641
ATGGCAGCTAAACAATTGTTGTTCGACGAAAATGCCCGCCAGGCTATCCTGCGCGGCGTTACCAAACTCTCCAAAGCGGTGGTCGCGACGCTCGGACCGAAAGGCCGCAACGTCGTCATTGACAAAAAATTCGGTTCCCCCACGGTGACCAAGGACGGCGTCAGCGTCGCCAAGGAAATCGAACTGGAAGATCCGTATGAAAACATGGGCGCCCAGATGGTCCGCGAAGTCGCGAGCAAAACCAGTGATCTCGCCGGCGACGGCACCACCACCGCGACGGTGCTGGCCGAGGCGATTTATCGCGAAGGCTTGAAGTTCGTCACCAGCGGCGCGAACCCCATCGGCATCCAGCGCGGCATCAACAAGGCCGTGGAAGCCGCCGTGGAACAGCTCGGCAAGATCTCCAAGAAGGTCAAGGACAAGGAAGAAATCAAGCAGGTGGCGGCCGTGTCCGCGAACTGGGATTTCGAAATCGCCGACAAGATCGCCGACGCGATGGACAAGGTTGGCAAGGACGGCACCATCACCGTGGAAGAAGCGAAGTCCATCGAGACGACGCTCGACGTGGTGGAAGGCATGCAGTTCGACAAGGGCTACCTGTCTCCGTATTTCGTCACAAACGCCGAGACGATGGAAGCCAAGCTGGAAGATCCTTACATTCTCATTTACGAGAAGAAAATCAGCAACCTGAAGGACATGCTGCCGTTGCTTGAGAAGGCGGCCCGCACCGGCAAGCCCTTCCTGATCATCGCGGAAGAAGTCGAAGGCGAAGCGCTCGCGACGCTCGTCGTGAACAAGCTGCGCGGCACGTTGAACGTCTGCGCGGTCAAGGCACCCGGCTTCGGCGACCGCCGCAAGGCCATGCTCGAAGACATTGCCGTCCTCACCGGTGGCAAGTTCATCACCGAAGACCTCGGCATCAAGCTGGAAAACGTGGAACTCGCCGATCTCGGCCGCGCCAAGAGCGTCGTGATTGACAAGGAAAACACCACCATTGTCGAAGGCAACGGCAAGAACAGCGACATCCAGGGCCGCGTGAACCAGATCCGCCGTCAAATCGAGGAAACCACCTCGGACTACGACCGCGAAAAATTGCAGGAACGCCTGGCCAAGCTCGCCGGTGGCGTGGCCGTCATCAACGTCGGCGCCGCGACCGAAACCGAGATGAAGGAAAAGAAGATGCGCGTGGAAGACGCGCTGCACGCCACCCGTGCGGCTGTGGAAGAAGGCATCGTCGCCGGCGGCGGCGTGGCTCTCATCCGTTGCATCAACGCCATTGACGGCGTGGAAGGCAGCAATGAAGACGAAAAGATCGGCGTCGGCATTGTGAAGCGTGCCGTGGAGGCCCCGCTCCGCGCGCTCGCGCAGAACGCCGGCGTGGAAGGCAGCGTCATCGTGGAAGCGGTCAAGAAGGCCAAAGGCAGCGAAGGTTACAACGTGGCCACCGGCAAATACGAAGACCTCGTCAAAGCTGGCGTGGTGGACCCGAAGAAGGTCACCCGTAGCGCGCTGCAGAACGCGGCGTCCATCGCCGGCCTGTTGCTGACCACCGAATGCCTCATCACCGACCTGCCCGAGAAGGAAAAACCCGCTCCGGCGGGTGCGCCCGGCATGGGCGGCATGGGCGGCATGGATTACTGA
PROTEIN sequence
Length: 547
MAAKQLLFDENARQAILRGVTKLSKAVVATLGPKGRNVVIDKKFGSPTVTKDGVSVAKEIELEDPYENMGAQMVREVASKTSDLAGDGTTTATVLAEAIYREGLKFVTSGANPIGIQRGINKAVEAAVEQLGKISKKVKDKEEIKQVAAVSANWDFEIADKIADAMDKVGKDGTITVEEAKSIETTLDVVEGMQFDKGYLSPYFVTNAETMEAKLEDPYILIYEKKISNLKDMLPLLEKAARTGKPFLIIAEEVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLEDIAVLTGGKFITEDLGIKLENVELADLGRAKSVVIDKENTTIVEGNGKNSDIQGRVNQIRRQIEETTSDYDREKLQERLAKLAGGVAVINVGAATETEMKEKKMRVEDALHATRAAVEEGIVAGGGVALIRCINAIDGVEGSNEDEKIGVGIVKRAVEAPLRALAQNAGVEGSVIVEAVKKAKGSEGYNVATGKYEDLVKAGVVDPKKVTRSALQNAASIAGLLLTTECLITDLPEKEKPAPAGAPGMGGMGGMDY*