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berkeley_reactor_200306_planktonic_scaffold_310897_20

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(31590..32135)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination/antitermination protein NusG n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 182.0
  • Bit_score: 317
  • Evalue 5.00e-84
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 182.0
  • Bit_score: 317
  • Evalue 7.00e-84
nusG; transcription antiterminator NusG similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 179.0
  • Bit_score: 216
  • Evalue 4.40e-54

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 546
ATGCGCAACCAGTGGTTCATCATCCAGACGCTTTCCGGCCAGGAACACAAGGTCAAGGAAAGTATTGAAAAGCGCGTCAAAGCCGACGAAATGCAGGACTACGTGAAGGAAGTCCTCGTTCCGATGGAAAAAGTGGTTGAAGTGCGCAACCAGAAAAAAACGGTTTCCAACCGCAAGCTCTGGCCGGGTTACGTGTTCGTGGACATGGTTTTGCTGGACGACGAAAACCGGGTGATTGAAAGGCCGTGGTATTTCATCCGCGAAACGCAGGGGGTTATCGGCTTTTTGAGCGATCCGCCGCAGCCGACGCCGACGGATGAAGTGGAGGCGATCAAGGCGCAGATTTCCGCCTCGGAAGAAACCGAGAAGCCGAAGGTGAATTTTGCCGTGGGCGAAACCATCAAAATCAATAATGGTCCGTTCCTGAATTTTAGCGGTGTGATCGAGGAAATTGACCCTGAGCGCGGCAAGTTGAAAGTCACCGTGAACATTTTCGGCCGCAACACGCCGGTGGAACTGGAATACTGGCAGGTGGAAAAATCGTGA
PROTEIN sequence
Length: 182
MRNQWFIIQTLSGQEHKVKESIEKRVKADEMQDYVKEVLVPMEKVVEVRNQKKTVSNRKLWPGYVFVDMVLLDDENRVIERPWYFIRETQGVIGFLSDPPQPTPTDEVEAIKAQISASEETEKPKVNFAVGETIKINNGPFLNFSGVIEEIDPERGKLKVTVNIFGRNTPVELEYWQVEKS*