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berkeley_reactor_200306_planktonic_scaffold_310897_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(32144..32395)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecE n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 83.0
  • Bit_score: 91
  • Evalue 2.70e-16
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 83.0
  • Bit_score: 91
  • Evalue 3.70e-16
secE; Preprotein translocase subunit SecE similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 51.0
  • Bit_score: 52
  • Evalue 3.90e-05

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 252
GTGAACAACTGGATCCATATTGCAATTTGGGCGGTCGTCATTCTGGCTGTTTTTTTCTACCTCTGGTGGCAGGGGCAGATTCAACGGCTGGCGGTTTATGTGACAGAAACGCGCGAAGAACTCAAGAAATGCTCCTGGCCGACCTGGGAGGAATTGAAGGGTTCCACCGCGCTCATCACCATCATGATCGCGCTGCTTGGCGGGTTTGTGGTGTTGGTGGACACCATTCTTTTTAAAATTTTTATCCACTAA
PROTEIN sequence
Length: 84
VNNWIHIAIWAVVILAVFFYLWWQGQIQRLAVYVTETREELKKCSWPTWEELKGSTALITIMIALLGGFVVLVDTILFKIFIH*