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berkeley_reactor_200306_planktonic_scaffold_310897_92

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(137187..138134)

Top 3 Functional Annotations

Value Algorithm Source
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 299.0
  • Bit_score: 433
  • Evalue 1.50e-118
D-alanine--D-alanine ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIG4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 299.0
  • Bit_score: 433
  • Evalue 1.10e-118
ddlA; D-alanine-D-alanine ligase similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 295.0
  • Bit_score: 269
  • Evalue 7.70e-70

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 948
ATGAGCCGGAAGTGGAACATCACTGTCATGCTGGGCGGACCCAGCGCCGAGCGGGAAGTCTCGCTGCGTTCCGGCGCGGCCGTGGCCCGGGCCCTGCGCTCGCTGGGCCACGCGGTGCAGGAACTCGATCCGCGCACCCCCGACTGGCGCCTGCCGCATCCGACCGACGTAGTGTTTCTCGCCTTGCACGGCACCTATGGCGAAGACGGCACGGTCCAGCGGCAGTTGGATGCCTTGGGCATGCCCTACACGGGCTGCGGCGCGGAGGCCAGCCGGCTGGCTTTTGACAAGGTGTTGACCAAGCAGCTTTGCCTTCAGGCCGGCGTGCCAACGGCAAAATTCATCACGGTGAATTCGCCCGAGGCGCCGTTCCCGGAGGCCCTTGAACCGCCGTTGGTGGTGAAGCCGCTGCGGCAGGGCTCCAGCGTCGGATTGCACTTCGTGGATCGCGAGCCGGACTGGCTGCCGGCGCTGGCGGAATCGCTGCGGTTCGATTCGGAACTGCTGGTGGAGGAGAGAATCATCGGCCGCGAGACAACGGTGGGCATTCTGGATGACCAGCCGCTGCCAGTTGTCGAGGTCCGCCCCAGGCAGGGTGACTACGATTACCAGCACAAATACACCGCCGGTTTCACCGAATATTTTTGTCCCGCGGATTTTGACGCGGCCACGACCCGGCGGATCCAGCAGGCGGCGCTGGGGGCGTTCAAAAGCGTGGGCGGCAGCGATTACGCGCGCGTGGACGTGATGGTGCGTCCCGATGGTTCGCCGGTGGTGCTGGAGGTCAATACACTGCCCGGCATGACCGAAACCAGCTTGTTGCCAAAGGCGGCGGCGGCGGCCGGCCTTGATTTTCCCGCGCTTTGCGGGCGGATGGTAGGACTGGCCCTGGCACGTCGCGCCAAAGCCAATGCATCGCCGGCGGCCGCGACACCGTGTGCCTGCTGA
PROTEIN sequence
Length: 316
MSRKWNITVMLGGPSAEREVSLRSGAAVARALRSLGHAVQELDPRTPDWRLPHPTDVVFLALHGTYGEDGTVQRQLDALGMPYTGCGAEASRLAFDKVLTKQLCLQAGVPTAKFITVNSPEAPFPEALEPPLVVKPLRQGSSVGLHFVDREPDWLPALAESLRFDSELLVEERIIGRETTVGILDDQPLPVVEVRPRQGDYDYQHKYTAGFTEYFCPADFDAATTRRIQQAALGAFKSVGGSDYARVDVMVRPDGSPVVLEVNTLPGMTETSLLPKAAAAAGLDFPALCGRMVGLALARRAKANASPAAATPCAC*