ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_26454_120

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(129667..130089)

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C1E3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 140.0
  • Bit_score: 212
  • Evalue 1.70e-52
Transposase {ECO:0000313|EMBL:ERM83863.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 140.0
  • Bit_score: 212
  • Evalue 2.40e-52
transposase similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 140.0
  • Bit_score: 206
  • Evalue 3.50e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodonellum psychrophilum → Rhodonellum → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 423
ATGAAAGATATTTTTTGTCCCAAATGCAAGAACCCCGAAGTGGTGAAAAGCGGCGTTGTAAAAGGAAAGCAGCGCTATAAGTGCCATGCCTGCAATTATCATTTTTCCGTAATGAAAGATGGCAAAAGGATCGATCCGTACTATGTGATCAAGGCCCTGCAGTTGTATATCGAAGGGGTAACATTCCGCGAGATCGAGCGCATCCTGGGGGTAAGCCATGTATCGGTAATCAACTGGGTGAAGGAGTATAATGTGAAGGCGCCGGAGAACCTCGACTACCACCCTACCTACCAGGTGCTGAACCACGCGGAACTGGCAGAGTTCTTCAGCGACAGGGAATCGCTGCGGGGTACCGGCAGTATGGTTACCGAACTCGGCGACAAATTTATGGTGATTAAATGGGAGCGGTTCAAGCGGAAGTAA
PROTEIN sequence
Length: 141
MKDIFCPKCKNPEVVKSGVVKGKQRYKCHACNYHFSVMKDGKRIDPYYVIKALQLYIEGVTFREIERILGVSHVSVINWVKEYNVKAPENLDYHPTYQVLNHAELAEFFSDRESLRGTGSMVTELGDKFMVIKWERFKRK*