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berkeley_reactor_200306_planktonic_scaffold_26454_193

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(200300..200845)

Top 3 Functional Annotations

Value Algorithm Source
Exonuclease, RNase T and DNA polymerase III n=1 Tax=Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6) RepID=L7W9M7_NONDD similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 180.0
  • Bit_score: 240
  • Evalue 1.00e-60
DNA polymerase III {ECO:0000313|EMBL:EZH73538.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 181.0
  • Bit_score: 252
  • Evalue 3.60e-64
exonuclease, RNase T and DNA polymerase III similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 180.0
  • Bit_score: 240
  • Evalue 2.90e-61

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Taxonomy

Aquimarina atlantica → Aquimarina → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 546
ATGATAACAAGTTCCAAAATAATCGTCATCGACCTGGAAGCCACCTGTTGGGAGGGCTTACCGCCCAAAGGCGAAGTCAGCGAGATTATCGAGATCGGTATCTGTGTGCTGGATACCGTTACCGGTGCGATTACCGGTAATAAAGGGATACTCATCCGGCCTGAACAATCTGCTGTAAGTGCGTTCTGCACCGGGCTTACCACCATCACAACCGGGCTGCTCGACCAGGAAGGCATTGCTTTCAGTGCCGCTTGTAAGGAACTGCGAAGCGCTTATAACGCACAACAGTATACCTGGGCCAGCTATGGCGCATACGACCGCAAGATGATGACCACGCAATGCAGCATGCGCCGGGAGGATTATCCCCTCTCACACGATCATATCAATGTGAAAGCGCTGTTTGCACAATGTCGCGGCCTGGGTAAACAAACCGGTATGAGCGGCGCACTGAAAGTGCTGCACCTGCCACTCGAAGGTACCCATCATCGCGGTGTCGACGACGCCCGCAATATTGCGAAGATCCTGTGGTGGTGCCTGCAACAGTAA
PROTEIN sequence
Length: 182
MITSSKIIVIDLEATCWEGLPPKGEVSEIIEIGICVLDTVTGAITGNKGILIRPEQSAVSAFCTGLTTITTGLLDQEGIAFSAACKELRSAYNAQQYTWASYGAYDRKMMTTQCSMRREDYPLSHDHINVKALFAQCRGLGKQTGMSGALKVLHLPLEGTHHRGVDDARNIAKILWWCLQQ*