ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_44244_216

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(290860..291303)

Top 3 Functional Annotations

Value Algorithm Source
Hypothetical lipoprotein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEI1_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 140.0
  • Bit_score: 83
  • Evalue 1.70e-13
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 140.0
  • Bit_score: 83
  • Evalue 4.70e-14
Strain DSM 12611 Contig12, whole genome shotgun sequence {ECO:0000313|EMBL:KIO52001.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.0
  • Coverage: 136.0
  • Bit_score: 83
  • Evalue 1.80e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium hibernum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 444
ATGCCTATCCGACAATTAGGTACCGTTGTTTGTTTCGTGCTTTCCATACTATGTTGTAGCGCTACGAGCAGTTATGCCCAAAGCCTGCAAACGATCGACGACCTGGAAGCCGCCACACAAAAGCGCCTTGACGAGGGCATTAATATGCTGGGGTATACCTCTATGTTATACACACAAATGGACAGCCTGCTAAACGTGGTGTATAAAAAATTAAGAAACAGCTTAAGTACCGGCGATGCGGAACAACTTAAACAGGAACAACGGGCCTGGTTGAAACAAAGAGACCGCTACTTCCGGCAGGCCTATCTTGACACGGCCAAAGCAACCGGTGTAAAACGCGAAGACTGGGGCGAGCTGGAATACCTGGGCGTCTACCAGGCAGAAACCGCATTTGTAAGAGACCGGGTTATTGTGCTGGTTAAAAGATTAAACCGTGTACAGTAA
PROTEIN sequence
Length: 148
MPIRQLGTVVCFVLSILCCSATSSYAQSLQTIDDLEAATQKRLDEGINMLGYTSMLYTQMDSLLNVVYKKLRNSLSTGDAEQLKQEQRAWLKQRDRYFRQAYLDTAKATGVKREDWGELEYLGVYQAETAFVRDRVIVLVKRLNRVQ*