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berkeley_reactor_200306_planktonic_scaffold_69065_55

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 64501..67614

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C7C56 similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 1047.0
  • Bit_score: 1038
  • Evalue 0.0
bifunctional preprotein translocase subunit SecD/SecF similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 1057.0
  • Bit_score: 1020
  • Evalue 2.50e-295
Protein-export membrane protein SecD {ECO:0000313|EMBL:ACU63660.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 1057.0
  • Bit_score: 1020
  • Evalue 1.30e-294

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3114
ATGGTAAAATTTTTTACCGCAGCCCTGATCCTCTTTTCGTTATGGCGGCTCTCATTCACCTTCATCGGCCATAACGTTGAGAAAAAAGTAAACGCTCAGTCAGAGAAGTTTGTCAACAGCACCGCACCCGATGCCAAAGGCGTTGATCGCGAATTGTTGCTCGACAAAGCTTACCAGCACATTACCGACAGTCTTCGCGGTGAAACCGTGTTTAACTTCCTGGGTATGAAATATACCTACCAGGAGGTTAAAGAAAAAGAACTGCAGCTGGGTCTCGACCTCCAGGGAGGTATGAGCGTAACGCTTGAAGTCGGGCTGGACGGTCTGGTGGAATCCATGAGTAATAACCCCAAAGATCCGGGCCTGCAGCGCGCTATCGCCGAAGCGGTACGCATGAAAGCCAATAGCGAGGCCGACTTTGTAAACCTCTTCGGACAAGCCTACCAGAAAGTAAACCCTAACGGTAAACTGGCAGTATTGTTCACCAAAGCTTCCCAGCCAAAAATTACCCTGAGCTCCAGCAACGAGCAGGTGCTTTCGGTAATCCGCGCAGAAGCCAAAGAAGCCATCAAACGTACTTATAACGTACTGAGCAAACGTATCGATAAATTCGGCGTATCCCAGCCAAGCATTAATCTCGACGAGAACAAGGGTATCATTACCGTTGAACTGGCCGGTGTTAAAAACCCTGAGTCTGTACGTAAATACCTCCAGGCTACTGCCAAACTGCAGTTCTGGGAAGTAGCCACCAACCAGGAAATGGCCCAGTACCTGATCAAAGCCAATACCGTACTGAAAAACTACCTGAAAGGTGGTAAAACAGAACCGGCAAAAGATACAGCCGTAGTTGCCAAAGCAGATAGCAGCAATGCTAAAGCAGATACCGGTAAAACCGTAGCTGCCGCCGCTCCTGCCACTGCCGATACCGGCAGCTTAAGCAGCCTGATGGCAAAAGAAGACACTTCCAAAGATGCTAAATCGCCTGCTGCAATCGGTGATAAAAAAGAAGATGATCTGTTCTCTATCATGCAGCCTATCGTAGACATGCAATCCGGCCAGTTTGTTGACGCCGTAATTGTAGGTGCGGTAATGAAAAAAGATGCGAATAAGCTGATGGAATACCTGAAACTGGATGTCGTTAAAAACCAGTTCCCTTCCAATATCAAATTCCTGCTGGGTGAATATCCCGGTGTTACTGCCGATAAAAAGAACGACCCACGCGTACCTTACGGTGTTTACGCCATCAAAACCGTGAATGGCAGCGATGATGCCAAACTGGAAGGCGACCGTGTAAAAAGCGCTAAATTCGACTACCAGCAAAATGGTAAAGCCGAAATCCAACTGGTAATGGACCAGCAGGGTACCGCACTGTGGGCCCGCCTGACCAAAGCCAATATCGGTAAACCAATCGCCATTACCCTCGACGACTTTGTATACTCTGCACCTACCGTTCAGAACGAAATCAATGGTGGTACTTCTTCCATCACCGGTAACTTTACCGCGAAAGACGGTACCGACCTGGCTAACATCCTGCAGACCGGTAAACTGGAAGCACCTGCCAAGATCGTACAGGAGCAGGTAGTAGGACCTACCCTCGGCCAGGAGTCTATCGACGGTGGTATCGAATCCTTTATCGTAGCCTTCCTCGTAATCTTCGTACTGATGATCGTGTACTACAATACCGGTGGTATCGTAGCCAATATCGCGCTTATCCTTAACATGCTGTTTACCTTCGGCGTACTGTCTAACCTTGGCGCTACCCTCACTATGGCCGGTATTGCCGGTATCGTACTGGGTATCGGTATGGCGGTAGATACCAACGTAATTATCTTTGAAAGGATTAAAGAAGAACTGGCACTGGGCGATACTTATGAAGAAGCCGTAAGCAAAGGTTACAGAAGGTCGTATGCACCTATTCTCGATGGTCACATCACCAGCTTGATCACTGCCGTAGTACTGTTGGTATTCGGTCTCGGCCCGATCAAAGGTTTTGCCACGACACAGATCATTGCCCTGTTACTGTCCCTGTTCACCGGTATCCTCGTATCCCGCCTGATCACCGACATCTACATGCGTCGCGGTCGTCACTTCAAGTATTTCACCGGCCTGTCCAAGTCTATCTTCCAGAAAGCGAAATTCCACTTTATCGAAAAACGTAAGATCTCTTATGTGATCTCTTCGATCCTGATCATTGCCGGTTTCGCTTCCCTGATCCATGGTTTCGACTATGGTGTGGAGTTCGACGGTGGCCGTAGCTATACCATCAAATTTGACCAGCCTCAGAAAGAAACTGAAGTAAGGGAAAAATTAAATGCACACCTGGGTAAATACCCTGTGGTGAAGAAGATTGGTGTAAGCGACCAGCTGAACATTACTACCGATTACCTGATCGAAAAATCCGGTCCGCAGGTTGAAAACGAAGTACTGTCCAAACTGTACGACGGTCTGAAAGCGGAGCATTTCCTTCCTGCCAATGTAGACCTGAATACCTTTGCGACCAAGTATGTACAGAGCACGCAAACCGTATTGCCAACCATCTCCGACGACCTGAAGAAAGGTGCGGTAACGGCGACTGCAGTAGCGGTACTTGCGATCTTTATCTACATCTTCGTTCGTTTCCGCAAATGGCAGTACTCTATGGGTACTATCGTGGCCCTGGTGCATGACGTGGCCATTACCCTGGCCGTGTTCTCCTTCTTTAAAGACATCGTGCCTTTCGCCCTCGAAATCGACCAGCACTTTATCGCTGCGGTACTGACCGTAATCGGCTTCTCGATGAACGATACCGTGATCGTGTTTGACCGTGTAAGGGAATACTTCCGTAAAGATCCGAACGGTAATAAGAAAGAGATCGTTAACCATGCGATCAACGATACCCTGAGCCGTACCATTATGACCTCGCTCACCGTATTCCTGACCGCCGTAATCCTGTTCATCTTCGGTGGTGAAGCCCTGCGTGGTTTTGCCTTCGCGATGGCGATCGGTGTACTGGCCGGTACTTATTCTTCCATCTTCGTTGCAGCGCCGGTACTGGTTGACCTCGACAAGAGCGATTCTTTAAGGATCGAAGAAGATAAAGAAGAGCGCATCAAACAACTGAAGGAACAAGCGTAA
PROTEIN sequence
Length: 1038
MVKFFTAALILFSLWRLSFTFIGHNVEKKVNAQSEKFVNSTAPDAKGVDRELLLDKAYQHITDSLRGETVFNFLGMKYTYQEVKEKELQLGLDLQGGMSVTLEVGLDGLVESMSNNPKDPGLQRAIAEAVRMKANSEADFVNLFGQAYQKVNPNGKLAVLFTKASQPKITLSSSNEQVLSVIRAEAKEAIKRTYNVLSKRIDKFGVSQPSINLDENKGIITVELAGVKNPESVRKYLQATAKLQFWEVATNQEMAQYLIKANTVLKNYLKGGKTEPAKDTAVVAKADSSNAKADTGKTVAAAAPATADTGSLSSLMAKEDTSKDAKSPAAIGDKKEDDLFSIMQPIVDMQSGQFVDAVIVGAVMKKDANKLMEYLKLDVVKNQFPSNIKFLLGEYPGVTADKKNDPRVPYGVYAIKTVNGSDDAKLEGDRVKSAKFDYQQNGKAEIQLVMDQQGTALWARLTKANIGKPIAITLDDFVYSAPTVQNEINGGTSSITGNFTAKDGTDLANILQTGKLEAPAKIVQEQVVGPTLGQESIDGGIESFIVAFLVIFVLMIVYYNTGGIVANIALILNMLFTFGVLSNLGATLTMAGIAGIVLGIGMAVDTNVIIFERIKEELALGDTYEEAVSKGYRRSYAPILDGHITSLITAVVLLVFGLGPIKGFATTQIIALLLSLFTGILVSRLITDIYMRRGRHFKYFTGLSKSIFQKAKFHFIEKRKISYVISSILIIAGFASLIHGFDYGVEFDGGRSYTIKFDQPQKETEVREKLNAHLGKYPVVKKIGVSDQLNITTDYLIEKSGPQVENEVLSKLYDGLKAEHFLPANVDLNTFATKYVQSTQTVLPTISDDLKKGAVTATAVAVLAIFIYIFVRFRKWQYSMGTIVALVHDVAITLAVFSFFKDIVPFALEIDQHFIAAVLTVIGFSMNDTVIVFDRVREYFRKDPNGNKKEIVNHAINDTLSRTIMTSLTVFLTAVILFIFGGEALRGFAFAMAIGVLAGTYSSIFVAAPVLVDLDKSDSLRIEEDKEERIKQLKEQA*