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berkeley_reactor_200306_planktonic_scaffold_101710_18

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(18569..21361)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Spirosoma spitsbergense RepID=UPI00036A8104 similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 851.0
  • Bit_score: 848
  • Evalue 5.40e-243
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 829.0
  • Bit_score: 839
  • Evalue 5.50e-241
TonB-dependent receptor {ECO:0000313|EMBL:ADB42102.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 829.0
  • Bit_score: 839
  • Evalue 2.70e-240

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2793
ATGCTGAAAAAATATACCTTTTTACTCCTGTTGCTTACCGGCTGGTTACAGGGTTATGCCCAGGATGCCTACCAGGTATCCGGCGGCATCTACGACTCGCTGGACCGGGAACCGCTTGCAGGCGCCACCCTTACTGTAAAGGGCACCACAAACGGTACCACGACCGATGCAAACGGGCATTTTTCTTTAACCACAAATGCCAAAATTCCATTTATACTCCAGGTATCTTACCTGGGGTACAGCAGCCAGGAATTTACCATAGCAGACCGGGCATCCGGTAGCCTTTCGCTTGCTTTAAACCCACAGCAATTCATCAGCCAACAGGTGGTCGTTACCGCGTCGCGCCGCCCCGAGAGCTTTATGAAATCACCGGTGAGTATCGAAAAGCTCGATATCAAAGCCATTAAAGAAAGCCCGGCGCCTACCTTTTTCGATGCACTCGAAAACCTGAAGGGCGTACAGATGACCACACTCAGCCTGATGTATAAAGTGCCCAATACGCGCGGTTTCAGCGGCACCACCAATTCCCGTTTCCTGCAGATGGTCGATGGCGTCGATAATATCTCGCCCGGTATCGGCGCCCCCGTTGCCAATGCCATCGGTCCCAGCGATCTGGATATCGAAAGCGTAGAATTGATACCCGGTGCCGCTTCTGCACTTTACGGACTCAACGCCGTAAACGGTATCTCCAATATGAAGACCCGCTCTCCTTTTGATTACCCGGGACTCAGCGTAGCGCAAAAGACGGGTGTCAATCATATTAATGATCCCTTGCAGCCGGCACGGCTGTTTACCGAAACATCGGTACGGTATGCACAGGTATTCAAAAACCGCTTCGCCTTCAAGATCAATGCAGACTATGCACAGGGTTACGATGGCATTGCCAATAACCTGCGGGACCAGAACCCCGATGCCAATACCTCGGTAAACCTAACCGGCAACGATAATCCCGGCAAAGACCTGATCAATGTATATGGCGACGAAGGCAGCAACCGCAAGACCCTTAGCCTGAACGGAAAAAATTATAGCGTAAGCCGTACGGGCTATGCAGAAAAGGACCTGGCCGATTATCACTTACGTAATCTCAAGGCCGACCTGGGACTTTACTACAAATTCGGGGGCGATAAACAGATCAGTTATACCTATCGCATCGGGCGCGTGAGCAACCTGTACCAACGGGGCAACCGCATTCAACTGGATGGTCTGCAGATCCAGCAGCACACCCTCGAATTTAAAGGCGATCATTTTTTTGTACGGGCGTACTATACCCGCGAAAACACCGGTAACTCCTATAACCTCCGTCCGCTGGGCGAGAATATGGACAAGGCCTTTAAAAGCAATGATGCCTGGTTTAACGATTATAAAACCGGCTACCTGAACGCCATAACCGGCGGTCAAAGCGATGCCGCCGCACAACAGGCTGCGCGCTCCTTTGCCGACCAGGGCCGTTACCAACCGGGCACAGCAGCCTTCGAACAAAAGAAAAAGGAACTGATCGGGATCAACAACTGGGACCAGGGCGCCGCCCTGATCATGAACACCGCGTTTGCCCATGTAGAGGGACAATACGACTTCTCCAGCTACACCCCGGGCTTCCAGACGCTTGCGGGATTTAACTACCGGAATTACTTTATCGAACCCGATGGTAACAGTTATGTCAACCCGGCTTCTTACCAGGACGTAAGCCGCAGCAATACACCGTTCAACTACTTCAGCTACGGCGGGTTTGTACAGGTTACTAAATTGCTGTTCGAAGAAAGGTTGAAACTCGTGGGCTCCCTGCGGGCCGATAAGGTACAGTATTTCGGTCCGAAGCTCAACCCCAGGATTGCGGCCGTGTATACCTTTGCCGGCGATCATAACATACGGATCTCGTACCAGAACGGCTTCCGTTTCCCCACGCTGTTCGAAAGCTTTTCTTATGTCGACAACGGCGGTATCAAAAGGCTGGGCGGCTTAAAGGTGATGTCGGAATACTTTGGGGTGATCGAGAATTCCTGGCTGCGCAGCTCCCAGGATGCTTTTATCAAAGCCGTGAATACCGATGTCAATAAGAACGGACTGAGCCAGGATGCCGCGATCGGCAAGAACAAAGGCCTTTTGGTGAAGAGCAACTACGGTTATATCAAACCCGAACAGATCAATTCTTTTGAAGCCGGGTATAAAGGCAGTTTCCTCGGCGGACGGCTCTTCGTGGATGCAGATTATTATTTCAATATCTACAAAGACTTTATCGGCCAGGTAGAGCTTACACGGCCCAACAGCGGCACGATCGGTGTGAACGACAGTACCATTTATGCCGCATACGACAAGAACCAGTCGAAGATCTACCGCATGTGGACCAACTCCACCAGCATAGTGAGCAACCAGGGCGCCAGCCTGGGTATCAGTTATGCCGTCTACCGTAAGTTCCTGGTATCGGGCAATGCCGCTTTTGCCACCCTGGTCAAGGTTTCGGAGGCCGATGCGTTGATCCCGGCCTTCAATACGCCCAAATGGATGATCAATCTTTCGGTAGGCAATAATGAAATATTTAAGAACGCCGGTTTTAACCTGAGCTGGAGGTGGCAGAGCGCCTTCGACTGGCAAAGTCCTTTGGCTAATGGCACCATACCCGCCTATGCTACGGCTGGCGCACAATTCAGCTACCGTGTGCCCAAAATAAATACCTCCTTTAAACTGGGCGCCACCAACCTGTTCAACAAAAGATATTACCAGTATGAAGGCGGCCCGGTAATCGATGGCTTCTATTACCTGACCCTTGTATACGATCCTAATTTTAAAAAGAGATGA
PROTEIN sequence
Length: 931
MLKKYTFLLLLLTGWLQGYAQDAYQVSGGIYDSLDREPLAGATLTVKGTTNGTTTDANGHFSLTTNAKIPFILQVSYLGYSSQEFTIADRASGSLSLALNPQQFISQQVVVTASRRPESFMKSPVSIEKLDIKAIKESPAPTFFDALENLKGVQMTTLSLMYKVPNTRGFSGTTNSRFLQMVDGVDNISPGIGAPVANAIGPSDLDIESVELIPGAASALYGLNAVNGISNMKTRSPFDYPGLSVAQKTGVNHINDPLQPARLFTETSVRYAQVFKNRFAFKINADYAQGYDGIANNLRDQNPDANTSVNLTGNDNPGKDLINVYGDEGSNRKTLSLNGKNYSVSRTGYAEKDLADYHLRNLKADLGLYYKFGGDKQISYTYRIGRVSNLYQRGNRIQLDGLQIQQHTLEFKGDHFFVRAYYTRENTGNSYNLRPLGENMDKAFKSNDAWFNDYKTGYLNAITGGQSDAAAQQAARSFADQGRYQPGTAAFEQKKKELIGINNWDQGAALIMNTAFAHVEGQYDFSSYTPGFQTLAGFNYRNYFIEPDGNSYVNPASYQDVSRSNTPFNYFSYGGFVQVTKLLFEERLKLVGSLRADKVQYFGPKLNPRIAAVYTFAGDHNIRISYQNGFRFPTLFESFSYVDNGGIKRLGGLKVMSEYFGVIENSWLRSSQDAFIKAVNTDVNKNGLSQDAAIGKNKGLLVKSNYGYIKPEQINSFEAGYKGSFLGGRLFVDADYYFNIYKDFIGQVELTRPNSGTIGVNDSTIYAAYDKNQSKIYRMWTNSTSIVSNQGASLGISYAVYRKFLVSGNAAFATLVKVSEADALIPAFNTPKWMINLSVGNNEIFKNAGFNLSWRWQSAFDWQSPLANGTIPAYATAGAQFSYRVPKINTSFKLGATNLFNKRYYQYEGGPVIDGFYYLTLVYDPNFKKR*