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berkeley_reactor_200306_planktonic_scaffold_176984_17

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 17370..19868

Top 3 Functional Annotations

Value Algorithm Source
Transporter, small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VTB9_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 835.0
  • Bit_score: 639
  • Evalue 2.60e-180
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EFK57020.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 835.0
  • Bit_score: 639
  • Evalue 3.70e-180
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 825.0
  • Bit_score: 617
  • Evalue 5.20e-174

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Taxonomy

Sphingobacterium spiritivorum → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2499
ATGCGCCTCCTGTTTTGCCTGATCTGTTTTATCGCAGCCTTTCCGGTGCTTTCTTTTGCACAGCAAAAGGGCGATACAGCCGTTATACCGCCGGCAAAGGATTCCGTTACCCCTTTTGTAAGAAAAGTATGGGCAGCTGCCGAACACGACAAACAACGTAACCAATCGAGCTACCGGTCAGACAAAATAAAGATCAGGCAACAGGCAATCTGGAATACGCTCAGTAATACCGCCCAGGATGTAAAGCTCTACCTGGTAACCAATGCCGATGTAGACCGTATCCCGGCGGCAATGGCTACCGTAAAACAGTCTTATGAGCTGTTACAGGACGGCATTTTTGTCCATAAAGGCACCGTACAGACCGAGCGGAATTTATCGGTTTCCTCTGCGGTGCTTTACCAGCTTATTGCGCAGACAGGGCAGTATAAAAAACGGGTGGATCAATATACCACCGATCTCATCGCATTCCGTAACAATATGGATTCCCTCCTAAGCGATCCCGCCATCTATATGTTCCCGAGCGACTCCATAGCATTGATGGCATACCTGAGCCGACTCAGGGTCATTGCTGCGGCAGGCGACCCGACAGACAATGCGCTCAACGCAAAACTGGACTCGGCACAATTGCTGCAGAACAATGTAGACCAGCTCCTGTTTTCCATGTCGGCATCCTACGAAAAAATAGAAGCCTACCGGAACGAGCTGGCTGGCTTGAATCTGAAGCGGGAATTCGTCAACATGTGGCAGGTGTCCCGGTATGACCGCCCGCTACCGGAAATACTTCATTTTTCTTTTGCCAAAGAGCAAATGGCGCTCCAGTACTACACCCGCGACAACCTGCTCCTGATACTGGTATGCCTCTTCCTCACCGGCTTTATCGTATTGGGTGTTTATTCTGTAAAAAGGCGGGTCAGGGATACTCCACAATACGATGTTATCAAACAGGAACTCATCCTGCAACATCCCGTAGCCTCTTCGCTTATTGTCGTGCTCAGCATCTGCCAGTTCGCTTTTATCAATGCGCCTTTTATTTTCAGCTTTTGTATCTGGTCGGTACAGATCATCTGCCTGCTTATGCTGCTCCGGGGATACATAACTCCGTTCTGGGTCAATTTCTGGATAGCATTGGCCACGCTATTCCTGCTTGCCTGCCTCGACAATTTTATTTTACAGGCCTCCCGTACCGAACGTTGGTTATTGAGTATCCTCTCCCTGGCCGGTATCCTCTTCGGTGCTTTCATTATACGTAACCGGCACAGGCCGGATCTGAAGGAGCAGTACATTATTCATTTCGTCCGCTTCCTGGTTGCTGCAGAGCTGCTCGCATTCCTGCTCAACCTGCTGGGCCGGTATAACCTCTCCAAAATTTTCTTCGTGGCCGGTTATACAGGCACCGTTATCGCCATCCTTTTCCTTTGGGTAATCCGGCTGATCAATGAAGGCCTGAGACTGGGCGCCTACCTGGCCCACAGTACCGGCAGGAAACCCTTCCAACTTAACTTCAACCGGCTCGGAGATAAAGCTCCCCGCATACTTTACGTCTTGCTGGTACTGGGCTGGGGCATCCTCGTGGGCCGTCATTTTTACCTGTTCCGGAGGCTGTCGGCGCCGATGGACCAGTTCCTGCACCAGGAAAGGTCGATCGGAGATTATTCCTTTTCTATCGGCGGTATTGTTCTTTTTATGTTGATCATGGTTTGTACCCTGGTGCTTTCGCGGATCATTTCGTTCTTCGCCGATGATGCAGTGGCTGTCCACAACAATAGCGGGCAATCGACCAGGCGGGTATCGCTGGGCAGTTGGATCTTGCTGATCCGCATCATGATCATTTGTACCGGTTTGTTCCTGGCTTTTGCGGCAACTGGCTTCCCACTCGACAAAATAACGATCGTATTGGGTGCATTGAGCGTAGGCATAGGCCTTGGTTTGCAAGGGCTGGTCAGCAACCTGATCAGCGGACTGATCATCGCATTTGAGAAACCGGTAAAGGTGGGCGACATTATCGAAGTTGGCGACAAGACGGGCGTCATGAAATCCATCGGCTTCCGTAGCAGCACGGTGTCGTTGCGCAACGGTTCCAACCTGGTGGTACCGAATGGCGACCTGCTAAACAACCGGATCGTAAACTGGTCCAATAGCAAGAGTACCAAAAAAGTAATACTGCCGCTTTCTGTAGCGTACGGTTCCGATTTAAAGACCGTAAAAAGCCTGCTGGAACATATTGCCGGCCAGGACGAACGTATCCTGGACGCGCCCGCTCCCAATGCGATACCCCGCAATTTCGGCGATAGCGCCATCAATATCGACCTGGTGTTCTGGGTAAGAAGTATCGGGGAAACAGAGGCAGTAACCGGGCAGCTTATACTTGACATCGACACGCAGTTCCGCGAACAAAAGATCGTTATCCCCTTCCCGCGCCAGGACGTACATATCTATACCGAGCAGGAAAAAGATAAAGACGAAAGTGAGGCCGGGCCTAACGATGGGCTACAGGCTTAG
PROTEIN sequence
Length: 833
MRLLFCLICFIAAFPVLSFAQQKGDTAVIPPAKDSVTPFVRKVWAAAEHDKQRNQSSYRSDKIKIRQQAIWNTLSNTAQDVKLYLVTNADVDRIPAAMATVKQSYELLQDGIFVHKGTVQTERNLSVSSAVLYQLIAQTGQYKKRVDQYTTDLIAFRNNMDSLLSDPAIYMFPSDSIALMAYLSRLRVIAAAGDPTDNALNAKLDSAQLLQNNVDQLLFSMSASYEKIEAYRNELAGLNLKREFVNMWQVSRYDRPLPEILHFSFAKEQMALQYYTRDNLLLILVCLFLTGFIVLGVYSVKRRVRDTPQYDVIKQELILQHPVASSLIVVLSICQFAFINAPFIFSFCIWSVQIICLLMLLRGYITPFWVNFWIALATLFLLACLDNFILQASRTERWLLSILSLAGILFGAFIIRNRHRPDLKEQYIIHFVRFLVAAELLAFLLNLLGRYNLSKIFFVAGYTGTVIAILFLWVIRLINEGLRLGAYLAHSTGRKPFQLNFNRLGDKAPRILYVLLVLGWGILVGRHFYLFRRLSAPMDQFLHQERSIGDYSFSIGGIVLFMLIMVCTLVLSRIISFFADDAVAVHNNSGQSTRRVSLGSWILLIRIMIICTGLFLAFAATGFPLDKITIVLGALSVGIGLGLQGLVSNLISGLIIAFEKPVKVGDIIEVGDKTGVMKSIGFRSSTVSLRNGSNLVVPNGDLLNNRIVNWSNSKSTKKVILPLSVAYGSDLKTVKSLLEHIAGQDERILDAPAPNAIPRNFGDSAINIDLVFWVRSIGETEAVTGQLILDIDTQFREQKIVIPFPRQDVHIYTEQEKDKDESEAGPNDGLQA*