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berkeley_reactor_200306_planktonic_scaffold_176984_22

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 23147..25081

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1189621 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Nitritalea.;" source="Nitritalea halalkaliphila LW7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 629.0
  • Bit_score: 744
  • Evalue 8.20e-212
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Nitritalea halalkaliphila LW7 RepID=I5BVN7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 629.0
  • Bit_score: 744
  • Evalue 5.90e-212
1-deoxy-D-xylulose-5-phosphate synthase similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 631.0
  • Bit_score: 737
  • Evalue 2.00e-210

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Taxonomy

Nitritalea halalkaliphila → Nitritalea → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1935
ATGGATACACCGGAAGCTTTGCGCCAACTTCAACTCCCGGCTTTACACCAACTCTGTACCGACCTGCGCAGCTTCCTGATCGATCATGTAGCGACACATGGCGGGCATTTCAGTTCCAGTCTCGGTGTCGTTGAATTAACGGTAGCCCTCCATTATGTATTCAATACCCCAATGGATAAACTCGTATGGGATGTGGGTCACCAGGCTTATCCGCATAAGCTGCTGACGGGCCGCGGACCGCGCTTTGACACCAACCGGACCCTGGGCGGCATCAGCGGCTTTCCCTGCAGGACAGAAAGCGAGTTCGATGCCTTCGGTACCGGACACTCCTCTACTTCCATATCCGCCGTATTGGGTATGGCCTGCGCAGCACGCTACCTGGGCGATACGGACCGCCAGCACATCGCCGTCATCGGCGATGGCGCCATGACAGCAGGCCAGGCCTTCGAAGCCTTAAACAATGCGGGTTATGAAGGCGCTAATATGCTCGTAATACTGAACGACAATAACATGTCGATCGATGCGAATACAGGGGCATTGCAACATTATCTTACGGAACTCACAACCGGCAGGCATTATAATACCCTGAAAGCTGGTCTCCGCAAATTACTCCCCTTGCAGGATGCACCGGGCAAGGGGCGGGCGGATATGCTGCGTGCATTCGAAAAGATGGTAAAAGGCGGCCTGCTGCAGTACAGTAACCTGTTTGAAGCGCTGAATATCCGCTATTTCGGTCCTATCGACGGACACGACCTCAAACAGTTGATTCGCATACTCGAGAAGCTGAAACATATACCGGGCCCTAAACTGTTGCATTGTGTCACGGAAAAAGGAAGAGGTTTTGCGCCGGCTATCGAACATAAAGCGCAATGGCATGCAACCGTCGCGTTTGATAAATACACGGGTATCAAATCGGGTATGGGCAACACTACCGGTCAAGCGGTAACCTTCCAGGAAGTATTTGGCCAGACCCTGATCGAGCTCGCGGGCAGGAATCCACGGGTTATGGCGATAAGTCCCGCAATGCTCTCCGGTAGTGCGTTAACGCGTATGAAACAGGAAATGCCGGAACGCGTTTTTGACGTCGGCATCACCGAACAACACGCCGTAACCTTCGCTGCCGGGCTGGCCACCGACGGCCTGATCCCCTATTGCACGATCTATTCCACCTTCCTGCAACGCGCCTATGACCAGGTAATCCATGATGTGGCCCTGCAACAGTTACCCGTCGTATTCTGCATCGATCGCGCCGGTGTGGTCGGTCCGGATGGCCCCACGCACCATGGCGCATTTGACATTGCGTTCCTGAGATGTATACCGGGCATAACCGGCGCCGCCCCTATGGACCTCGAAGACTTCCGGGACCTGCTATTCACCGCACAGAGCGGTACGATCTCGGGGCCTTTCGCCATCCGTTACCCCAAAGCTGCGGGGGCACACCTCCCATCAGGTCGAGACTTCCATACCCGGCCAACCGGCAAAGGCCGGAAGCTCAGGCCCGGTAAAGATATCGCGATCCTTTCGCTCGGCCCTGCGGGACAATATGTACAAGAGGCCTGTACCGAACTGGCGCAGGAGCAACTGGACGTCGCGCATTACGATCTGCGTTTCTTCAAGCCGCTCGACGAAGCATTGTTACACGAGGTATTCCAACAGTTCGCTACAGTCATCACGGTCGAAGACGGTTGTATAACCGGTGGCGTAGGCAGCGCCGTACTGGAGTTTATGGCGGAACACGGTTATACGGCAAGGCTTAAACGCCTGGGGCTGCCCGATAGCTTTGCCACGCAGGGCAGCCAGCAGCAATTACATGCATTATATGGTTATGATAAAAAAGCGATCATGACATGGGTACGCAGGCTTGCGGCCGATACAGGAGCAGAGCGGCTTATACCGGAACAGCAGGCCGGTTCCGGCAAAGCCCTGACTTATTAA
PROTEIN sequence
Length: 645
MDTPEALRQLQLPALHQLCTDLRSFLIDHVATHGGHFSSSLGVVELTVALHYVFNTPMDKLVWDVGHQAYPHKLLTGRGPRFDTNRTLGGISGFPCRTESEFDAFGTGHSSTSISAVLGMACAARYLGDTDRQHIAVIGDGAMTAGQAFEALNNAGYEGANMLVILNDNNMSIDANTGALQHYLTELTTGRHYNTLKAGLRKLLPLQDAPGKGRADMLRAFEKMVKGGLLQYSNLFEALNIRYFGPIDGHDLKQLIRILEKLKHIPGPKLLHCVTEKGRGFAPAIEHKAQWHATVAFDKYTGIKSGMGNTTGQAVTFQEVFGQTLIELAGRNPRVMAISPAMLSGSALTRMKQEMPERVFDVGITEQHAVTFAAGLATDGLIPYCTIYSTFLQRAYDQVIHDVALQQLPVVFCIDRAGVVGPDGPTHHGAFDIAFLRCIPGITGAAPMDLEDFRDLLFTAQSGTISGPFAIRYPKAAGAHLPSGRDFHTRPTGKGRKLRPGKDIAILSLGPAGQYVQEACTELAQEQLDVAHYDLRFFKPLDEALLHEVFQQFATVITVEDGCITGGVGSAVLEFMAEHGYTARLKRLGLPDSFATQGSQQQLHALYGYDKKAIMTWVRRLAADTGAERLIPEQQAGSGKALTY*