ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_4894_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 12581..13030

Top 3 Functional Annotations

Value Algorithm Source
PilT domain-containing protein n=2 Tax=unclassified Opitutaceae RepID=H1IWV3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 151.0
  • Bit_score: 95
  • Evalue 4.30e-17
twitching motility protein PilT similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 151.0
  • Bit_score: 95
  • Evalue 1.20e-17
Twitching motility protein PilT {ECO:0000313|EMBL:AHF89210.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.8
  • Coverage: 151.0
  • Bit_score: 95
  • Evalue 6.10e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Opitutaceae bacterium TAV5 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 450
ATGACCTATTGCGATTCTTCGTTTCTGGCTTCGCTCTATGTGACCTCGGACGTTTTTAATCCGCTGGCACGCAAGGAGGCTGCCAAGTTCACCAGCGCCATTCCCTACACGCTTCTGAACGAACTCGAACTCTTGAATGCGCTCCGTCGCGGCCTGGGGGATGGCTCTCTCGATCAAGCCGCCCATGACTCCGTCATCCGCGACATTGACGCGGACGAGGCGGACGCCTTGCTGGAACGCGCTGCCCTTAACCAGATCAAGCTTTACGAGAAGGCCCGCGACCTTTCCAAGAAGCATACGCCCGCTTTGGCCTGCCGTTCGCTCGACATCCTGCATGTTGCGTCCGCCTTGATTCTCGGAGCCAAGAAATTTGCCAGCTTTGACCATCGCCAGCGAAAACTGGCGATGGCTGTCGGCCTTCCCCTCGTACCTTCATCCATTTCGAAGTAA
PROTEIN sequence
Length: 150
MTYCDSSFLASLYVTSDVFNPLARKEAAKFTSAIPYTLLNELELLNALRRGLGDGSLDQAAHDSVIRDIDADEADALLERAALNQIKLYEKARDLSKKHTPALACRSLDILHVASALILGAKKFASFDHRQRKLAMAVGLPLVPSSISK*