ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_59817_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(3190..3882)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017460FA similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 233.0
  • Bit_score: 243
  • Evalue 2.00e-61
HPP family similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 219.0
  • Bit_score: 241
  • Evalue 1.20e-61
HPP family {ECO:0000313|EMBL:BAO28025.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 219.0
  • Bit_score: 241
  • Evalue 6.20e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfuritalea hydrogenivorans → Sulfuritalea → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGTTTGTTGTCGCGCGATTGGTGGAGTGGCTGGGGACGGAGCTTGATCCGGCCAGCTTGAAGGAAAAGGCCGTGTCCGGGGTGGGCGGCGTGCTGGGCATCCTGCTGGTGATGGCGGTGAGCCATTCCGTGCTGGGGCTGTCGGGCGCGGCGATGCTGATCGCCTCGATGGGGGCGAGTGCGGTGCTGGTCTTTGGCGTGCCGCACGGGCCGCTGTCGCAACCCTGGCCGGTGCTGGCGGGGCATGGGGTCTCGGCGTTGATCGGGGTCGCGTGTGCGCGGTTGATGCCGGATGCGATGCTGGCCGCCGCCTGCGCGGTGGGGCTCTCGATCGTGGCGATGCGCGTGCTGAAGTGCATTCACCCGCCGGGCGGAGCCACGGCGCTCACGGCGGTGATGGGCGGCCAGGCGGTGCACGATCTGGGCTATTCCTTCGTCGCCTGCCCGGTGCTGCTCAATGCCCTCGTGATCGTGGCTGCGGCGGTGGTGGTAAATTACCCCTTCGCCTGGAGGCGCTATCCGGCGGCGCTCGTCCGCCAGACCGCCCCGCCCACCGATCCGCGCAAGGTGACGCACGAAGACGTGATCGCCGCCCTGGAGCGGCTGGACACCTTTGTCGACATCACGGAAGACGACCTCCTTCGTCTCCATGCGTCATTGACGAAACGGGTGGAGGAGCGGAAGACTGGTTGA
PROTEIN sequence
Length: 231
MFVVARLVEWLGTELDPASLKEKAVSGVGGVLGILLVMAVSHSVLGLSGAAMLIASMGASAVLVFGVPHGPLSQPWPVLAGHGVSALIGVACARLMPDAMLAAACAVGLSIVAMRVLKCIHPPGGATALTAVMGGQAVHDLGYSFVACPVLLNALVIVAAAVVVNYPFAWRRYPAALVRQTAPPTDPRKVTHEDVIAALERLDTFVDITEDDLLRLHASLTKRVEERKTG*