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berkeley_reactor_200306_planktonic_scaffold_59817_28

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 32945..33502

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISS8_KORVE similarity UNIREF
DB: UNIREF100
  • Identity: 32.6
  • Coverage: 190.0
  • Bit_score: 100
  • Evalue 1.70e-18
Membrane protein {ECO:0000313|EMBL:KJR62339.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 177.0
  • Bit_score: 106
  • Evalue 3.30e-20
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 190.0
  • Bit_score: 100
  • Evalue 4.70e-19

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Taxonomy

Azospirillum thiophilum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAAACTCATCCACATCCTCCCCGCCGCGCTCCTCGCGCTCACCCCCATCATCGCTACCGCAGCCAGCTCCGCGCCCGCCTCGTGTTGCGGCCAGATGCCCTCCGGCACGATGACCTGCCCGGCCTTTGCCCAAAAGGTTGCCATGGTCGATCTGCTGGAGATCCAGCTCGGCAAGGTCGCCCAGACCAATGCCTCGCTGCCCTCGGTGAAGAAATTCGGCGCGTTCATGACCGCCAGCCACACCGAGATCAATGCCCGGCTCGCAAAGGTCGCGGCCGAGTGCAACATCCCGCTGCCCACGCAGCTCGACGCCCCGAGCCAGGCCACGCTGAAGAAGCTCTCCGCGCTCAAGGGCCCCGCCTTTGACAAAGCCTACATCCCCGCCATGGTCGCCGGCCACACGCAGGTCCTCGCCATGGTGAAATCCTTCGCCACCACCTGCCCGAATCCGCAGATGAAGGCCTTTGCAGAGAAGATCACCCCCATCATCGCCAAGCATCTCTCCGCCGCGCAGAAGGTGCAGGCCCAGATGCAAAAGGACGGCCTCCTGCCGTAG
PROTEIN sequence
Length: 186
MKLIHILPAALLALTPIIATAASSAPASCCGQMPSGTMTCPAFAQKVAMVDLLEIQLGKVAQTNASLPSVKKFGAFMTASHTEINARLAKVAAECNIPLPTQLDAPSQATLKKLSALKGPAFDKAYIPAMVAGHTQVLAMVKSFATTCPNPQMKAFAEKITPIIAKHLSAAQKVQAQMQKDGLLP*