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berkeley_reactor_200306_planktonic_scaffold_122971_1330

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(1508907..1510682)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSW0_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 593.0
  • Bit_score: 547
  • Evalue 1.60e-152
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 580.0
  • Bit_score: 553
  • Evalue 3.80e-155
ABC transporter permease {ECO:0000313|EMBL:AKC81729.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 580.0
  • Bit_score: 553
  • Evalue 1.90e-154

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Taxonomy

Verrucomicrobia bacterium IMCC26134 → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1776
ATGCCAGCTTCGCGGCGCAGGGCTGAAATTTGGCCCACCATCAAGAGGTTTCTCCCGTACCTTTGTGTGTACTGGAGGAGACTGATCGTTATCTTTTTCCTGCTGCTGATCGCGGCGGGATTTGACCTGATCAGGCCCTGGCTGATCGGCCGTATCGTCGACGGGGCGGCGAAAGTTCAGCCATGGGCCACGGTGATGTGGCCGCTCGGGTTTTTCCTCCTCTCGGTGCTCGGGCGCAGTATTAGCATTCTCAGCCGCAACTATTATACGCAGCAGACCGGCATGCGCATCACCTGTGACCTGCGGGTGGATCTCTTCCGGCACCTGCAAAGCCTCTCGCTCCGGTTTTACGACTCCCGCCACACGGGAAAGATCGTCCACCGCATCAGTGGCGACACGGCGGCGATTCACAGTCTCGTCACCGGGGCGTCGGTGAACTTCATCGGCGACATCATTACGATCATCGGCGTCCTCGTCGTCCTGGCGAACGCCCACTGGCCGCTCGCCGTTGTGACCTACACGCTGCTGCCGCTCTTCGTTTTCAACTATCTCTGGCATCGCCGCCGCCTGCGGGTGGAAAGCCGTACGCATCGCCGCAACTGGGACCGCGTGATGAGCTTCCTGCACGAGCGTATCGCCAGCACCCGGCTTGTCCGCGCCTTTGCCACGGAGGGAACAGAAATCGAGAGCTTCCGCCAGCGCATCGAGGCGGATTATGTGAACTACAGCCGCGTCGTCTGGCGCAACTCGCTCCTCAGCGTCGGGGCGGATTTCCTGACCGGCATCGGCGTCTTTATCGTCCTGGGCTACGGCTCCTGGCTCGTGATGAACGGCAAGGGCGAACTGACCATCGGTCAGCTCACGGCGTTCCTCTTTTACCTGGGCCTGCTCTACACGCCGATCATCCGCGTGGTGGATTCCAATGCCATCGTCCAGCAGGCGGCCACGGCGCTGGAGAAAATCTTCGCCCTCCTCGATACCAAGCCGCACATCCCGGAGAACGAGAAACTCCCGCAATTGCCCAAGCTCGACGGCAGCATCACCTTTGACCACGTCTCCTTTGCCTACCGGCCGCAGCACACCACGCTGCACGATCTTTCCTTCCGGGCAAATCCTGGCGAAACCATTGCACTGGTCGGACCCAGCGGATCAGGCAAAACGACCGTCATTACACTCCTGGCGAGGTTTTACGATCCCACCGCCGGGCGCATCCTGCTCGATGACCTCGACATCCGCGACTACAACGTCCAGTCGCTGCGCCGTCAGATCGGCATCGTCATGCAGGACAACATTCTTTTCTCCGGCACCATCGCGGAAAACATCCGCTACGGCCGCCCGGAGGCGTCGGATGAGGAAATGTATGAGGCAGCCAGGGCGGCGAATGCGCATGAGTTCATCGTCCAGAGTCCCCAGGGCTACGGAGCCATGCTCGGCGAACGTGGCATGCAGCTTTCCGGCGGGCAAAGGCAGCGCCTCGCCATTGCGCGGGTGATCCTGAAAAACCCGAAGATCCTCATCCTCGACGAGGCTACCTCGGCGCTTGATACGGAGTCCGAGCGGCTCGTGCAGGAGGCTCTTGAGCGCCTGATGGAAAAGCGCACCTCGATCGTCATCGCGCACCGGCTCTCCACCATCGTCAACGCCAGCCGCATCCTCGTGCTAAAGGCGGGCCGTATCGAGGAGCAGGGTCGTCACGACGAACTGCTCAAGAAGGGCGGACTGTATCACCACCTCCACAAGCTCCAGTTCGCCCGGCAGGACGCAGTCGCGGCGTAG
PROTEIN sequence
Length: 592
MPASRRRAEIWPTIKRFLPYLCVYWRRLIVIFFLLLIAAGFDLIRPWLIGRIVDGAAKVQPWATVMWPLGFFLLSVLGRSISILSRNYYTQQTGMRITCDLRVDLFRHLQSLSLRFYDSRHTGKIVHRISGDTAAIHSLVTGASVNFIGDIITIIGVLVVLANAHWPLAVVTYTLLPLFVFNYLWHRRRLRVESRTHRRNWDRVMSFLHERIASTRLVRAFATEGTEIESFRQRIEADYVNYSRVVWRNSLLSVGADFLTGIGVFIVLGYGSWLVMNGKGELTIGQLTAFLFYLGLLYTPIIRVVDSNAIVQQAATALEKIFALLDTKPHIPENEKLPQLPKLDGSITFDHVSFAYRPQHTTLHDLSFRANPGETIALVGPSGSGKTTVITLLARFYDPTAGRILLDDLDIRDYNVQSLRRQIGIVMQDNILFSGTIAENIRYGRPEASDEEMYEAARAANAHEFIVQSPQGYGAMLGERGMQLSGGQRQRLAIARVILKNPKILILDEATSALDTESERLVQEALERLMEKRTSIVIAHRLSTIVNASRILVLKAGRIEEQGRHDELLKKGGLYHHLHKLQFARQDAVAA*