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berkeley_reactor_200306_planktonic_scaffold_136582_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(21516..22169)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family id=4535926 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 223.0
  • Bit_score: 210
  • Evalue 1.00e-51
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 221.0
  • Bit_score: 207
  • Evalue 3.20e-51
Tax=GWC2_Nitrospirae_42_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 223.0
  • Bit_score: 210
  • Evalue 1.40e-51

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Taxonomy

GWC2_Nitrospirae_42_7_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 654
ATGCGAGTGCTCGTCGTGGAAGACGACCCCGGCATCATCGAGGTGCTGGACTATGCCCTGCGCCGGGAAGGCCATGACGTGACATGCGTGTCTTCCGGGCTGGAGGCAGTCCGCCGCGCGAGCGAGGCCGAGTTTATCCTGCTCGACGTGGGGTTGCCGGATATTGATGGATTTGAAGTCTGCCGCCGGATCCGCCGCACGCTGGAAACTCCGCTCATGTTTCTCACCTCGCGGAGCGAGGAGGTCGACCGCGTGGTGGGGCTGGAACTCGGCGGCGATGATTACCTGGCCAAGCCCTTCAGTACGCGCGAACTCACCGCCCGGATCAAGGCGGTTGCAAGGCGCTTCGAGCGTGCCGCAGAGCCACCACCTGCCGCGCTCTCGGTGGATCCCGCCACGCATCGCGCCTCCTTCCTGGGCAAATCGCTCGACCTCACGCGCATCGAGTTTGCCCTGCTGGCCGCCCTGCAGGCGGAGCCGGGACGAGTCTTTACTCGCGACCAGCTCCTGAATCTCGCCTGGCCTGACGGCGGAATGGTCACCGACCGCACGGTGGACGCCCACATCAAGACTCTGCGCAGGAAGCTGACTGATCCCGACCTCATCGAGACCGTGCGCGGAGTCGGCTACCGCTTGTGCGAGAAAGCGGCATGA
PROTEIN sequence
Length: 218
MRVLVVEDDPGIIEVLDYALRREGHDVTCVSSGLEAVRRASEAEFILLDVGLPDIDGFEVCRRIRRTLETPLMFLTSRSEEVDRVVGLELGGDDYLAKPFSTRELTARIKAVARRFERAAEPPPAALSVDPATHRASFLGKSLDLTRIEFALLAALQAEPGRVFTRDQLLNLAWPDGGMVTDRTVDAHIKTLRRKLTDPDLIETVRGVGYRLCEKAA*