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berkeley_reactor_200306_planktonic_scaffold_151594_38

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(52158..53288)

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSZ3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 365.0
  • Bit_score: 319
  • Evalue 2.70e-84
Integrase family protein {ECO:0000313|EMBL:EEF57028.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 365.0
  • Bit_score: 319
  • Evalue 3.80e-84
integrase similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 359.0
  • Bit_score: 183
  • Evalue 6.60e-44

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1131
GTGCTGTTCTACGGTGCAGATGTGAAATCCAGCTCCGAAGCCCCAAAAAGATGGGTAAAAACGCGCCTGCAGAATCTCGTACGTCATAGCGAGAGCGGACGCTACTATGCCCGAATCTGGAGCAACGGCAAAGAAGTTTGGAAGTCGCTCAAGACGTCCCATTTTTCCGTGGCTGAGGCCCGGCTTTCGAAGTTCAAAAATGAGCAGCGAGCTCGGGTGGACGTAGAAGTCGCTACGGCAGACGCCAAGATCACGTTTGGAGAGGCTGCGGCTATTTTTGTCGGCCAGATCGAGGCCGACGCGTCGATAAAATCCAGTACCAAGGCGTACCAAAAGGAAACCTTGAAAGCCTTGGAGAAAAGCTGGCCGGCGCTCTTCTCAACGGAGATCCGCAAGATCGGGCCCGGAGCCTGCCGCGAGTGGGGCAGGAGTTATTCCAGGCAAGGCAGTGCCACGCGGTTTAATGGCACTCTCAGCACCTTACGGCGAATCTTCGACATCGCTCTTAAGAATGGTGTCATCTACTCCAACCCGGCGGCTGAGATTGCCAGGAGGTCCGTGAAGGCAAAAAAGCTCGAGCTTCCTTCTCGTGATCAGTTTGCGGCATTCGTTGCTGAACTCGCACGGGCCGGAGGTCGAGATTCCCGAAATTGCGCTGATCTGGTGCAGGGCCTCGCCTTTACCGGCATGCGCAAGGGCGAGGCCCGGCATCTTGCCTGGGAGGATCTCAATTTTGCCTCCGACTTGATTACCGTTCGAGGCGATCCGGAGGAGGGCACGAAAAACGGAGAAATCCGGATCATTCCCATGATCCCAGAGGCGAGAGCGCTATTCTCCCGGATGCAAGATGCTCGCGCTGCGGAATCAGGTACAGAAAAGGTCTTTCTTGTGAATGAATGCCAGAAGGCGATGGACCGGGCGGTAAAGCTCGTCGGAATGGCGAGGATTACCCATCACGATTTGCGGCACTTCTTTGCGACAGTGTGCATCGAAAGCGGAGTCGATATCCCGACGGTTTCGCGATGGCTCGGCCACAAAGACGGCGGAGCCCTTGCCATGAAGACCTACGGGCACCTGCGCCAGGAACACAGCCTCGCCCAGGCGCGAAAGGTATCATTCCTGGCGGCATGA
PROTEIN sequence
Length: 377
VLFYGADVKSSSEAPKRWVKTRLQNLVRHSESGRYYARIWSNGKEVWKSLKTSHFSVAEARLSKFKNEQRARVDVEVATADAKITFGEAAAIFVGQIEADASIKSSTKAYQKETLKALEKSWPALFSTEIRKIGPGACREWGRSYSRQGSATRFNGTLSTLRRIFDIALKNGVIYSNPAAEIARRSVKAKKLELPSRDQFAAFVAELARAGGRDSRNCADLVQGLAFTGMRKGEARHLAWEDLNFASDLITVRGDPEEGTKNGEIRIIPMIPEARALFSRMQDARAAESGTEKVFLVNECQKAMDRAVKLVGMARITHHDLRHFFATVCIESGVDIPTVSRWLGHKDGGALAMKTYGHLRQEHSLAQARKVSFLAA*