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berkeley_reactor_200306_planktonic_scaffold_202757_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 25622..26734

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family with LacI sensor n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IS44_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 362.0
  • Bit_score: 186
  • Evalue 4.60e-44
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 362.0
  • Bit_score: 186
  • Evalue 1.30e-44
GntR family transcriptional regulator {ECO:0000313|EMBL:AHF90466.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.0
  • Coverage: 362.0
  • Bit_score: 186
  • Evalue 6.50e-44

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Taxonomy

Opitutaceae bacterium TAV5 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1113
ATGGCTAGACCAGCCCTTCGGAATTCATCGAACAGCTTGAGCCTGACTCTGGCAGCGCAGGATCTCAAACAGCCCCTTCACGTGCGCGTCAGGCAGATCTTGCGTGAACGCATTTTGAAGAATTTCCAGCACGGCGAGAGATTCTATTCCGAGCGCGAGTTGATCCAGAGCCTCGGGGTTTCGCAGCCGACGATCCGGCGGGCGCTCACCGATCTCGCTGGGGAGGGGTATTTGATTCCCGACCCGCGCCGGGGATTTTTCGTCCAGCACCATGCCGAGACCCGCTACGTCGGCCTCATACGCCCGTCGTGGAAGGCCGTTTCCTATTCCGACGAGGACGTGGCGTATTCGGTGGTCTGTCGGGAGTTGAATTATCAGTTCATCCCTCACGACATGCACAAGGGCGATTCCGTGGATGCACTCATGGCATCTCTCACGCGGAAGGCGACCGAGGAGCGCATCCTCCTGGCCGGGCATACCGTGGAGGTCACTCTGGAGCTCAGCAAACGGCTGCAGGCCGAGGGGTATCGCCATCTCGTCGTAGGTTCGCTCGTTCCCGGCATCTCGGGCAGTTCGCTCTCCATCGACCACGATGTGGAGACCGACCTCATCCTCGATCATTTGCTGAGCCTCGGCCACGAGCGCATTGTTTTCATGGTCAATGAGCCGCGGATGCTGCTCATCACCAGCCTCCGCGCCGAGACCATCCAGCGAAAGCTGAAGGAGCGCAAACTGCCCCATGTGCAGATCGTTTTCTGCGATACGAAGAACTGGGAAAGCTCCTTCCAGGCGGCTCACAAAAAGGCGCACGAGCTGCTCCGCGGCAAGACTCCACCCACGGCGATCGTGCCACTCTCCGGCGTGGGCGCCTGGGCCGTACTGCGCTACGCCGTGCAAAACCATATCGACATCCCGGGGAAGCTCTCGCTCGTCAGCTTCGATCCGATGATCAATTCCGAAATCCTGCCGATCGCGATGACGGAACTGACCTTCTCCCAGGTCGCCCGGGCGCGTACCGCCATCGATTTGCTCTGGTCCGACACGACGATTCCCGCCCACATCAAGGTGACTCCGTCCCTGAGCGTGCGGGAAACGACCGGGCCGGCGCGTTAG
PROTEIN sequence
Length: 371
MARPALRNSSNSLSLTLAAQDLKQPLHVRVRQILRERILKNFQHGERFYSERELIQSLGVSQPTIRRALTDLAGEGYLIPDPRRGFFVQHHAETRYVGLIRPSWKAVSYSDEDVAYSVVCRELNYQFIPHDMHKGDSVDALMASLTRKATEERILLAGHTVEVTLELSKRLQAEGYRHLVVGSLVPGISGSSLSIDHDVETDLILDHLLSLGHERIVFMVNEPRMLLITSLRAETIQRKLKERKLPHVQIVFCDTKNWESSFQAAHKKAHELLRGKTPPTAIVPLSGVGAWAVLRYAVQNHIDIPGKLSLVSFDPMINSEILPIAMTELTFSQVARARTAIDLLWSDTTIPAHIKVTPSLSVRETTGPAR*