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berkeley_reactor_200306_planktonic_scaffold_147250_106

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(109770..110564)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter n=1 Tax=Microbacterium yannicii RepID=UPI000302614F similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 266.0
  • Bit_score: 414
  • Evalue 7.40e-113
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 266.0
  • Bit_score: 418
  • Evalue 4.20e-114
polysaccharide/polyol phosphate ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 264.0
  • Bit_score: 399
  • Evalue 5.40e-109

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 795
GTGACCACCGCCGTCGTCGGCGCCGCCGGCTCCCCGCGGCGTTACCTGCACTCGCTGTGGCTGCTGTCGGCGCGCGATCTGCGCGTGCGCTACGCGACGAGTGCCCTCGGCTACCTGTGGTCGGTGCTGGATCCGCTCGTGATGAGCGCGATCTACTGGTTCGTGTTCACCCAGGTGTTCCAACGCGGAGACATCGGCGCCCAGCCCTACATCGTGTTCCTCCTGTCGGGCCTGCTGCCGTGGGTGTGGTTCAACGCGGCGGTCGGCGACCTCACCCGCGCCTTCAACAAGGACGCGCGCCTCGTGCGCTCGACCGCGATCCCGCGTTCGATCTGGGTCAACCGCATCGTGCTCAGCAAGGGCGTCGAGTTCGTCTTCTCGCTGCCCGTGCTCGTGCTGTTCGCGGTCTTCTCGGGGGTGACCGTGGGCTGGGGGCTGCTCCTGTTCCCGGTGGCCGTCGCGCTGCAGGCGATCCTGCTGGTCGGGCTCGGTCTGCTCGTCGCGCCGCTGTGCGTCCTCTGGGGCGACCTGGAGCGCACGACCCGGCTGATCCTGCGGGCCCTGTTCTACGCCTCGCCGATCATCTACGGTGTGAACGACCTTCCCGGGGTCTTCCGCGACCTGGCGCTGCTCAACCCGCTGTCGGGCATCTTCACCCTGTACCGCGTGGGCCTGTTCCCCGGCGAGGCGGACGTCACGGCCGTGCTGGTCGCGGCCGTCCTCAGCCTCGGCATCCTCGCCCTCGGCGTCGTCGTCTTCCGGCGCCTGGAGCCCGCCGTGCTGAAGGAGCTGTGA
PROTEIN sequence
Length: 265
VTTAVVGAAGSPRRYLHSLWLLSARDLRVRYATSALGYLWSVLDPLVMSAIYWFVFTQVFQRGDIGAQPYIVFLLSGLLPWVWFNAAVGDLTRAFNKDARLVRSTAIPRSIWVNRIVLSKGVEFVFSLPVLVLFAVFSGVTVGWGLLLFPVAVALQAILLVGLGLLVAPLCVLWGDLERTTRLILRALFYASPIIYGVNDLPGVFRDLALLNPLSGIFTLYRVGLFPGEADVTAVLVAAVLSLGILALGVVVFRRLEPAVLKEL*