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berkeley_reactor_200306_planktonic_scaffold_174515_6

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 5741..6403

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=2 Tax=Microbacterium RepID=H8E523_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 220.0
  • Bit_score: 413
  • Evalue 8.10e-113
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 220.0
  • Bit_score: 414
  • Evalue 6.70e-113
rplD; ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 220.0
  • Bit_score: 374
  • Evalue 2.00e-101

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGCTGACTCGACTCTCGCGCTCGACGTCCACAGCCCCAACGGCAAGAAGGCCGGCTCGGTCGAGCTGCCCGCCGCGCTGTTCGACGTCAAGACGAACATCCCCCTCATCCACCAGGTCGTCGTGGCGCAGCGCGCCGCGGCTCGCCAGGGCCCGCACTCGACCAAGCGTCGTGGCGAGGTCTCGGGTGCCGGCCGCAAGCCCTTCAAGCAGAAGGGCACGGGTAACGCCCGTCAGGGCTCGATCCGCGCGCCGCACATGACCGGTGGTGGCATCGTCCACGGCCCGAAGCCGCGCGACTACGCCCAGCGCACCCCCAAGAAGATGATCGCCGCCGCCCTGCTGGGCGCGCTGAGCGACCGTGCTCGCGGTGGCCGCCTCCACGTCGTCGACTCGTTCGGCATCGAGGGCGCCCCGTCGACCAAGGCCGCTGCGGCCGTCCTCGCCGAGCTCGCGCCGACCAAGAACGTCCTGGTCGTCATCGAGCGCGGCGACGAGCTGAGCGTCAAGAGCGTGCGCAACCTCGCGTACGTCCACGTGCTCACGTTCGACCAGCTGAACGCCTACGACGTTCTCGTCTCCGACGACATCGTCTTCACCAAGGCCGCCTACGACGCGTTCGTCGCGTCGAAGAGCGCCACCACCGAGGAGGTCTCGGCATGA
PROTEIN sequence
Length: 221
MADSTLALDVHSPNGKKAGSVELPAALFDVKTNIPLIHQVVVAQRAAARQGPHSTKRRGEVSGAGRKPFKQKGTGNARQGSIRAPHMTGGGIVHGPKPRDYAQRTPKKMIAAALLGALSDRARGGRLHVVDSFGIEGAPSTKAAAAVLAELAPTKNVLVVIERGDELSVKSVRNLAYVHVLTFDQLNAYDVLVSDDIVFTKAAYDAFVASKSATTEEVSA*