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berkeley_reactor_200306_planktonic_scaffold_174515_110

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(102400..103185)

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B42D3 similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 258.0
  • Bit_score: 448
  • Evalue 3.50e-123
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:KJL22532.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 254.0
  • Bit_score: 451
  • Evalue 5.80e-124
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 258.0
  • Bit_score: 369
  • Evalue 5.90e-100

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 786
GTGAGTGCATCCACGGGCCCGGGAGCCGTCGCGCAGGCCGCACCCGCGGCATCCGACGAGATCGTCGTCGAGGTCTCCGATCTCACCGCCGGCTACCTGCCGGGCATCAACATCATCAACGGCGCGAACCTCGTCGCCCGCAAGGGCGAGCTGATCGGCATCATCGGTCCCAACGGCGCCGGCAAGTCCACGCTGCTGAAGTCGATCTTCGGGCTCGTGAAGGTGCGCGGCGGCGACATCACGGTGAACGGCGAGTCGATCGTGGGCCTCAAGGCCGACAAGCTCGTCCAGCGCGGGGTGGCGTTCGTCCCGCAGACGAACAACGTCTTCCCGTCGCTGTCGATCGAGGAGAACCTGCAGATGGGGCTCTACCAGAACCCCAAGATCTACGCCGCCCGCCTCGAGTTCGTGACCGGCATCTTCGCCGAGCTCGGCAAGCGCCTCAAGCAGCGCGCCGGCTCGCTGTCCGGCGGCGAACGGCAGATGGTGGCGATGAGCCGCGCCCTCATGATGGACCCGTCGGTGCTGCTGCTCGACGAGCCGAGCGCCGGGCTGTCGCCCGTGCGTCAGGACGACGCCTTCATCCGCGTCTCCGACATCAACAAGGCGGGCGTGACGACGATCATGGTCGAGCAGAACGCGCGCCGCTGCCTGCAGATCTGCGACCGCGGCTACGTCCTCGACCAGGGCCGCGACGCGCACGAAGGCACGGGGCGCGACCTGCTGAACGACCCGCAGGTCATCGGTCTCTACCTGGGTACGCTGGGCACGGACGAGGAGCACTGA
PROTEIN sequence
Length: 262
VSASTGPGAVAQAAPAASDEIVVEVSDLTAGYLPGINIINGANLVARKGELIGIIGPNGAGKSTLLKSIFGLVKVRGGDITVNGESIVGLKADKLVQRGVAFVPQTNNVFPSLSIEENLQMGLYQNPKIYAARLEFVTGIFAELGKRLKQRAGSLSGGERQMVAMSRALMMDPSVLLLDEPSAGLSPVRQDDAFIRVSDINKAGVTTIMVEQNARRCLQICDRGYVLDQGRDAHEGTGRDLLNDPQVIGLYLGTLGTDEEH*