ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_174517_42

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(49336..50199)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 287.0
  • Bit_score: 525
  • Evalue 2.70e-146
Diaminopimelate epimerase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXU8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 287.0
  • Bit_score: 525
  • Evalue 1.90e-146
dapF; diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 285.0
  • Bit_score: 413
  • Evalue 3.00e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 864
GTGGCAGAGCCGATCGCATTCACCAAGGGTCACGGCACGGGCAACGACTTCGTGATCGTCCCGGACGACGACGGTGCCCTCGACCTGTCGGCCGACCAGATCGCCGCGCTCTGCGACCGCCGCTTCGGCATCGGCGGCGACGGCATCCTGCGCGTCGTCCGCAGCGCCCGCCTCCGCGAGGGCGAGGCGACGGCGGATGCCGAGTGGTTCATGGACTACCGCAACGCCGACGGATCGGCCGCGGAGATGTGCGGCAACGGCACCCGCGTGTTCGCGAAGTACCTCGTCGACACCGGCCGCGCGAACATCGATGACGCGCCGCTGCGCATCGGCACCCGCGCGGGCGTGAAGACCCTCACTCGCAGCGACCTCGGCTTCGAGGTCGACCTCGGCGTGTTCCGGGTCGACGGCGATGTCGTGGTGAAGGCGAGGGGCCTCGACGTCGCCCGGCCCGGACAGGGCGTCGACGTCGGCAACCCGCACGTGGTCGTTGCCCTCTCCAGCTCCGCGGAGCTCGACGGACTCGACCTCACGGTGCAGCCGCAGCTGCATCCCGACCCGGTCGAGGGCGCCAACGTCGAGTTCGTGGTCCCGGCCGATCCGCTCGTGCAGAACGGCGTCGGAACGATCCGGATGCGTGTGTTCGAGCGGGGCGTCGGGGAGACCCTGTCGTGCGGCACCGGTGTGGCCGCCGCCGCGCTGGCGGTCCGGCACTGGGCGGGGGCCGCGGCGCCGGACCGGTGGAGCGTGGAGGTGCCCGGCGGCACGCTCGGTGTACGCATCGTCGCCGAGGCCGACGGAGAGCACGTCCTCCTGTCCGGACCGGCGGCGCTCGTCTACTCAGGCGAGGTCCGTCTCGCCTGA
PROTEIN sequence
Length: 288
VAEPIAFTKGHGTGNDFVIVPDDDGALDLSADQIAALCDRRFGIGGDGILRVVRSARLREGEATADAEWFMDYRNADGSAAEMCGNGTRVFAKYLVDTGRANIDDAPLRIGTRAGVKTLTRSDLGFEVDLGVFRVDGDVVVKARGLDVARPGQGVDVGNPHVVVALSSSAELDGLDLTVQPQLHPDPVEGANVEFVVPADPLVQNGVGTIRMRVFERGVGETLSCGTGVAAAALAVRHWAGAAAPDRWSVEVPGGTLGVRIVAEADGEHVLLSGPAALVYSGEVRLA*