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berkeley_reactor_200306_planktonic_scaffold_293678_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 19170..21248

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 717.0
  • Bit_score: 1005
  • Evalue 2.10e-290
Transcription termination factor Rho n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E206_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 717.0
  • Bit_score: 1005
  • Evalue 1.50e-290
rho; transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 728.0
  • Bit_score: 857
  • Evalue 1.40e-246

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2079
GTGGAGTCCCTCTCCGAGATCCAGACCGAGAACATCGAGAACGTCGAGAACACGGAAGCCGCCGGCGACGCCGCCGCGACCGAGGTGACCGACGCCCCCACCGCCGAGGAGACCCCGGCGGAGGAGACCCCCGTCGAGGAGGCCGCCGCCGAGGAGGCTCCCGCGGAGGAGGCTCCCGCGGAGGAGCCCGTCGCGCCGGAGGAGCCCGCCGCCGAGGCCGTCCAGAGCGAGGCCCCCGACGTCGAGGTGCCCTCGGATGCCGAGGCCCCCGCCGCCGCGAGCGAGGAGGCGCCGGTCGTCGAGAAGCCCGTCAAGGCGCCGCGCAAGCGTGCCCCGCGCCGTGCGAAGAGCACCGACGTGCCGGCCGCCGAGGCGACGGATGCCGAGGCTCCCGCCGCCGAGACCGCCGCCGCCGAGACCGTCGTCGAGACCGCCGACGCGCCCGCCGCCGAGAGCGCGGACGCGCCCGCCGAGACCGTCGCGCCGGCGGAGACCCCCGACACCGCGGCTGCGGCGACCGACGCCATCGCCCCGTCCGGTGAGGGCGAGACCGCTCCTGCCCAGGACGAGACGGCTGCCGACGCTGCAGCCGCCGACGCCACGGCATCCGGCGAGAACGCGGCCGAGGGGGAGACCCCGAGCCGCAGCCGCAGCCGTTCGCGCAGCCGCAGCCGCAACCGCGGCCAGCGCGGCGAGAACGCCCAGGCCGCGCAGAACGCCCCGGCCACGCAGGGCGGCCAGAACGCGCCGGCCGCTCCCGCGGCCCCCGCCGAGGACAACACGTCGAACGACGACGCCGACGAGCAGGGTCAGGGACGCGGTCGTCAGCGCAACAAGCGTCGCGGCGGACAGAACCAGAACGGCGACGAGTTCGAGACCGAGATCGGCGAGGACGACGTCCTCATCCCGATCGCCGGCATCCTGGACGTGCTCGACAACTACGCGTTCGTGCGCACGACGGGCTACCTGCCCGGCGCCAGCGACGTCTACGTCTCGCTCGGCCAGGTCAAGAAGTACAACCTGCGCAAGGGCGACGCCGTCGTCGGCGCCATCAAGCAGCCGCGCGAGGGCGAACAGTCGAGCCGCCAGAAGTACAACGCGCTGGTGAAGGTCGACGCCATCAACGGCCTGTCGGTCGACGACGCCGCCGAGCGCGTCGAGTTCGGCAAGCTCACGCCGCTCTACCCGCAGGAGCGCCTGCGCCTGGAGACGGCGCCGGAGAAGCTCACGCAGCGCATCATCGACCTCGTCGCCCCGATCGGCAAGGGCCAGCGCGGTCTCATCGTCGCGCCGCCGAAGGCCGGCAAGACGATCGTCCTGCAGCAGATCGCGAACGCGATCGCGACGAACAACCCCGAGGTCCACCTCATGGTCGTGCTCGTCGACGAGCGCCCCGAAGAGGTCACCGACATGCAGCGCACGGTCAAGGGCGAGGTCATCGCCTCGACCTTCGACCGCCCGGCCGAAGACCACACGACCGTCGCGGAGCTCGCCATCGAGCGCGCCAAGCGCCTCGTGGAGCTCGGCCGCGACGTCGTCGTGCTGCTCGACTCGATCACGCGTCTCGGCCGCGCCTACAACATCTCGGCGCCCACCAGCGGCCGCGTGCTCAGCGGTGGCGTCGACGCGTCGGCCCTGTACCCGCCCAAGCGCTTCTTCGGTGCCGCCCGCAACATCGAGAACGGCGGATCGCTCACCATCCTCGCGACGGCGCTCGTGGAGACCGGCTCCAAGATGGACGAGGTCATCTTCGAGGAGTTCAAGGGCACCGGCAACAGCGAGCTGCGCCTGTCGCGTCAGCTGGCCGACAAGCGCATCTTCCCCGCCGTCGACGTCAACGGTTCGTCCACGCGCCGCGAGGAGATGCTGCTGAACCCCGACGAGGTCAAGATCACCTGGAAGCTGCGTCGCGCCCTCGCCGGCCTCGACCCGCAGCAGGCTCTCGAGGTGGTCCTCGGCAAGCTCAAGGAGACGAGCTCGAACGTGGAGTTCCTCTACCAGATGCAGAACGTGCAGATGAAGTCGGTGTCCACGACCGCCGGCGGCCACAGCCACGGACACGAGAACAGCATCCGCTGA
PROTEIN sequence
Length: 693
VESLSEIQTENIENVENTEAAGDAAATEVTDAPTAEETPAEETPVEEAAAEEAPAEEAPAEEPVAPEEPAAEAVQSEAPDVEVPSDAEAPAAASEEAPVVEKPVKAPRKRAPRRAKSTDVPAAEATDAEAPAAETAAAETVVETADAPAAESADAPAETVAPAETPDTAAAATDAIAPSGEGETAPAQDETAADAAAADATASGENAAEGETPSRSRSRSRSRSRNRGQRGENAQAAQNAPATQGGQNAPAAPAAPAEDNTSNDDADEQGQGRGRQRNKRRGGQNQNGDEFETEIGEDDVLIPIAGILDVLDNYAFVRTTGYLPGASDVYVSLGQVKKYNLRKGDAVVGAIKQPREGEQSSRQKYNALVKVDAINGLSVDDAAERVEFGKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIATNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNISAPTSGRVLSGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNGSSTRREEMLLNPDEVKITWKLRRALAGLDPQQALEVVLGKLKETSSNVEFLYQMQNVQMKSVSTTAGGHSHGHENSIR*